Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC078918.1-201ENST00000498515 228 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC109927.2-201ENST00000506416 303 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC026784.1-201ENST00000507986 352 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 RNA5SP164-201ENST00000516533 110 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 SNORA31.22-201ENST00000517204 135 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 CDH12P4-201ENST00000517835 295 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 CDH12P3-201ENST00000517935 295 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 CDH12P1-201ENST00000518435 295 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC008489.1-201ENST00000524271 483 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC123904.3-201ENST00000547218 814 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 ARL2BPP2-201ENST00000550907 489 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC105224.1-201ENST00000587055 421 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 GLUD1P4-201ENST00000590914 418 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 AL137849.1-201ENST00000604767 169 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 RBM11P1-201ENST00000604951 799 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC103710.3-201ENST00000608157 948 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC017083.3-201ENST00000609955 700 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 RMST_8.1-201ENST00000610287 165 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 AC004696.1-201ENST00000614345 607 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 OR52H1-202ENST00000641796 1061 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.41□□□□□ -1.86
SHFQ7M4L6 TAB3P1-202ENST00000452645 1634 ntBASIC3.41□□□□□ -1.86
SHFQ7M4L6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
SHFQ7M4L6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SHFQ7M4L6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
SHFQ7M4L6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHFQ7M4L6 Y_RNA.22-201ENST00000362492 102 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 RNA5SP130-201ENST00000364431 114 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 RNU4-12P-201ENST00000365233 139 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 MIR184-201ENST00000384962 84 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 SNORD115-47-201ENST00000391226 86 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 AL590002.1-201ENST00000406554 418 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 BTF3P7-201ENST00000407097 488 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 RNU2-36P-201ENST00000410361 191 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 RPL21P24-201ENST00000413752 448 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 EI24P1-201ENST00000416584 867 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 AL807761.1-201ENST00000417622 171 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 AC002075.2-201ENST00000425207 252 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 ARF4P2-201ENST00000430209 526 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 GPR143P-201ENST00000434155 205 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 SNORA71B-202ENST00000439232 272 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 TXNP1-201ENST00000441872 371 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 MTCO3P45-201ENST00000443036 613 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 AL121871.1-201ENST00000443413 436 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 RPS29P31-201ENST00000446147 164 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 AC008481.1-201ENST00000463278 396 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 RN7SL330P-201ENST00000469709 307 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 MRPL49P2-201ENST00000521066 465 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 FAM60DP-201ENST00000524174 632 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 AC011979.2-201ENST00000527568 352 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SHFQ7M4L6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 AL157700.1-201ENST00000561973 1432 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 AC008745.1-201ENST00000604064 271 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 AL592436.1-201ENST00000605135 558 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 AC004067.1-201ENST00000608733 700 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 MIR6820-201ENST00000611508 62 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 AL713922.2-201ENST00000619384 716 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
SHFQ7M4L6 AC009812.4-201ENST00000569134 1805 ntBASIC3.4□□□□□ -1.87
SHFQ7M4L6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC138915.3-201ENST00000562908 1389 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHFQ7M4L6 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 RNU6-1097P-201ENST00000363586 107 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 RNU1-32P-201ENST00000363937 159 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 Y_RNA.248-201ENST00000364501 109 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 SNORA23-201ENST00000365128 182 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms