Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 AC087359.1-201ENST00000508335 1740 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 AL022578.1-201ENST00000439330 1433 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 ASNSP3-201ENST00000451989 1306 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 RNY3P9-201ENST00000384727 106 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 RNU6-952P-201ENST00000391164 108 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 RNU4-72P-201ENST00000410754 173 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 AC083875.1-201ENST00000419509 405 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 COTL1P1-201ENST00000422309 375 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 AL590233.1-201ENST00000430017 456 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 UBE2D3P1-201ENST00000436669 444 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 SNRPEP7-201ENST00000438350 220 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 AL831737.1-201ENST00000441288 271 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 AC025750.2-201ENST00000442609 450 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 EEF1E1P1-201ENST00000446998 430 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 snoU109.4-201ENST00000458953 143 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 RPL31P50-201ENST00000471002 296 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 ARL4AP2-201ENST00000507378 601 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 SCGB1D5P-201ENST00000515134 247 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 RNU6-27P-201ENST00000516146 107 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 RNA5SP468-201ENST00000516782 93 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 RNU6-678P-201ENST00000516832 109 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 OR7K1P-201ENST00000546439 926 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 EEF1B2P4-201ENST00000551398 348 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 LARP7P3-201ENST00000579888 337 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 AC090616.2-202ENST00000584248 222 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 AC015871.2-201ENST00000603605 948 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 AC068313.1-201ENST00000604028 1008 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 AC091925.2-201ENST00000625059 256 ntBASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RFWD3Q6PCD5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AC011477.1-204ENST00000623416 1325 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 RPL21P132-201ENST00000331267 462 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 Y_RNA.18-201ENST00000362461 102 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 Y_RNA.169-201ENST00000363745 96 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 RNU6-629P-201ENST00000384061 103 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 SNORD51-201ENST00000384320 80 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 RNA5SP274-201ENST00000410484 108 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AL365203.2-201ENST00000423444 196 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AC019178.2-201ENST00000423595 505 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 DUTP6-201ENST00000425573 462 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AC007742.1-201ENST00000425789 329 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 EZH2P1-201ENST00000431167 291 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AL139132.1-201ENST00000431587 344 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 ELOCP26-201ENST00000436067 329 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 MUPP-201ENST00000438111 566 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 MTND5P14-201ENST00000441481 1267 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 OR6K5P-201ENST00000447050 945 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 RPL36AP33-201ENST00000450395 310 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AC010285.1-201ENST00000470580 392 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AL049873.1-201ENST00000480540 376 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AC096576.1-201ENST00000489014 359 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 MTCYBP43-201ENST00000513621 740 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AC119751.5-201ENST00000514077 770 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 SNORA31.26-201ENST00000517250 137 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AC136618.2-201ENST00000575091 400 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AL627309.6-201ENST00000606857 840 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AL603755.1-201ENST00000619504 163 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AL031667.3-201ENST00000620124 655 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AL445264.1-201ENST00000621719 171 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AP000676.3-201ENST00000623299 569 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AC079248.2-201ENST00000623779 326 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AC002546.1-201ENST00000588041 2504 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 FAM35CP-201ENST00000554755 2470 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 AL355596.1-201ENST00000565399 3996 ntBASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RFWD3Q6PCD5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.03□□□□□ -1.92
RFWD3Q6PCD5 API5P2-201ENST00000397055 1498 ntBASIC3.03□□□□□ -1.92
RFWD3Q6PCD5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RFWD3Q6PCD5 RNA5SP88-201ENST00000365560 109 ntBASIC3.03□□□□□ -1.92
RFWD3Q6PCD5 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
RFWD3Q6PCD5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RFWD3Q6PCD5 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms