Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AL139276.1-201ENST00000311910 1001 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AL161781.1-201ENST00000354277 403 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 RNU5E-8P-201ENST00000363502 116 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AC019155.1-201ENST00000382242 574 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 Y_RNA.527-201ENST00000384573 102 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AL356421.1-201ENST00000403255 413 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AL606923.1-201ENST00000406616 190 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 RNU2-3P-201ENST00000410144 191 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 RNU6-847P-201ENST00000411115 108 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 CYCSP19-201ENST00000411715 316 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AC018865.2-201ENST00000423631 129 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 COX6B1P7-201ENST00000430845 235 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 MTATP6P16-201ENST00000434543 526 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 FABP5P14-201ENST00000437273 393 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 MTND2P29-201ENST00000438595 412 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AC104058.1-201ENST00000448028 297 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AL592156.1-201ENST00000508758 304 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AC104136.1-201ENST00000512969 394 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 RNU6-566P-201ENST00000516790 107 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AC128657.1-201ENST00000549459 145 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AC067852.4-201ENST00000590314 478 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 OR6R2P-201ENST00000609216 300 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 MIR6875-201ENST00000617506 72 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AL133243.3-201ENST00000617415 3004 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 AL592437.2-201ENST00000421655 2434 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 ZNF807-201ENST00000328088 1707 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 RNU6-1115P-201ENST00000362490 106 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 RNU1-14P-201ENST00000362759 152 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 RNA5SP130-201ENST00000364431 114 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 Y_RNA.378-201ENST00000365652 113 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 SET-203ENST00000372688 801 ntTSL 2 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 RN7SKP159-201ENST00000410657 292 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 AC108032.1-201ENST00000416706 207 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 AL157831.1-201ENST00000426134 473 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 RPL23AP74-201ENST00000437246 471 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 AL118520.1-201ENST00000450770 291 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 RNU7-180P-201ENST00000459240 63 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 snoU13.22-201ENST00000459428 104 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 RPL23AP11-201ENST00000475260 469 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 TRBV1-201ENST00000476502 284 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 RPL7P43-201ENST00000478876 753 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 RPL23AP41-201ENST00000484754 458 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 TRBVA-201ENST00000498804 316 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 AC099522.1-202ENST00000514718 367 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 RNA5SP519-201ENST00000516480 119 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 HMGB1P19-201ENST00000517578 577 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 IMMP1LP2-201ENST00000552954 492 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 AL161713.1-201ENST00000555538 145 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 MYL12BP1-201ENST00000569826 507 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 MIR4775-201ENST00000581168 75 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 AC053481.4-201ENST00000583164 216 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 uc_338.12-201ENST00000616344 181 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 MAPK10-286ENST00000641208 8747 ntBASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms