Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 RPL21P12-201ENST00000559810 515 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AC087683.2-201ENST00000611384 326 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AC084757.4-201ENST00000616350 526 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AC009159.2-201ENST00000617603 606 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AC007671.2-201ENST00000637344 619 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 DDX10P1-201ENST00000448545 1933 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 MTND5P27-201ENST00000428871 1720 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC092125.1-201ENST00000562568 1995 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AL138713.1-201ENST00000624026 2130 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 RNU6-432P-201ENST00000384196 109 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 MIR23B-201ENST00000384832 97 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 MIR670-201ENST00000390142 98 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 U3.19-201ENST00000390893 196 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 RPL21P3-201ENST00000395517 478 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC011233.1-201ENST00000422812 283 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AL593851.1-201ENST00000426171 157 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AL159987.2-201ENST00000432754 307 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 TAAR7P-201ENST00000436141 242 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AL162389.1-201ENST00000449233 177 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 ELOCP23-201ENST00000452014 332 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC146507.2-201ENST00000460608 476 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 RPL30P5-201ENST00000494923 336 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 OR2A20P-203ENST00000498397 1268 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 MTCYBP35-201ENST00000503630 1137 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC006445.2-201ENST00000510061 472 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC002400.1-201ENST00000569310 726 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC008751.2-201ENST00000597885 980 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 CKS1BP3-201ENST00000600888 237 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 PRELID3BP8-201ENST00000604148 295 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC106791.2-201ENST00000604680 391 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC107214.2-201ENST00000608204 634 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC107294.3-201ENST00000609211 526 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 TUG1_2.1-201ENST00000614234 87 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC012150.2-201ENST00000621300 544 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 AC112204.3-201ENST00000623822 332 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 MIR4275-201ENST00000636486 87 ntBASIC3.16□□□□□ -1.9
CASC4Q6P4E1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.16□□□□□ -1.9
CASC4Q6P4E1 SDAD1P2-201ENST00000441308 2028 ntBASIC3.15□□□□□ -1.9
CASC4Q6P4E1 AC006378.2-201ENST00000623178 2476 ntBASIC3.15□□□□□ -1.9
CASC4Q6P4E1 CCT4P2-201ENST00000233836 1548 ntBASIC3.15□□□□□ -1.9
CASC4Q6P4E1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CASC4Q6P4E1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.15□□□□□ -1.9
CASC4Q6P4E1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 DYNLT3P1-201ENST00000378574 347 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 MIR183-201ENST00000384958 110 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AL357075.1-201ENST00000404107 726 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AC012498.1-201ENST00000424037 437 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 RPL7L1P10-201ENST00000427790 463 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 RPS12P18-201ENST00000442381 270 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 MTND2P24-201ENST00000453434 806 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 RN7SL75P-201ENST00000461926 281 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AC072039.1-201ENST00000477611 581 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 LINC00888-204ENST00000487386 421 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 Y_RNA.717-201ENST00000517106 92 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 RNU6-840P-201ENST00000517275 65 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 MTATP6P15-201ENST00000527233 835 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 ZNF321P-202ENST00000550843 495 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms