Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.22□□□□□ -2.21
LRRK2Q5S007 AC233728.2-201ENST00000425348 757 ntBASIC1.22□□□□□ -2.21
LRRK2Q5S007 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.22□□□□□ -2.21
LRRK2Q5S007 RNA5SP330-201ENST00000517096 96 ntBASIC1.22□□□□□ -2.21
LRRK2Q5S007 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.22□□□□□ -2.21
LRRK2Q5S007 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
LRRK2Q5S007 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.22□□□□□ -2.21
LRRK2Q5S007 PABPC1P9-201ENST00000426076 1612 ntBASIC1.22□□□□□ -2.21
LRRK2Q5S007 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
LRRK2Q5S007 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
LRRK2Q5S007 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.22□□□□□ -2.21
LRRK2Q5S007 MIR320A-201ENST00000385302 82 ntBASIC1.22□□□□□ -2.21
LRRK2Q5S007 RPS29P29-201ENST00000456396 171 ntBASIC1.22□□□□□ -2.21
LRRK2Q5S007 snoU13.3-201ENST00000459441 104 ntBASIC1.22□□□□□ -2.21
LRRK2Q5S007 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.22□□□□□ -2.21
LRRK2Q5S007 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.22□□□□□ -2.21
LRRK2Q5S007 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.22□□□□□ -2.21
LRRK2Q5S007 AC090525.3-201ENST00000605601 189 ntBASIC1.22□□□□□ -2.21
LRRK2Q5S007 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.22□□□□□ -2.21
LRRK2Q5S007 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.21□□□□□ -2.22
LRRK2Q5S007 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
LRRK2Q5S007 MTND4P12-201ENST00000498999 1377 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 DYNLT3P1-201ENST00000378574 347 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.21□□□□□ -2.22
LRRK2Q5S007 CBX3P6-201ENST00000430257 527 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.21□□□□□ -2.22
LRRK2Q5S007 AL078601.1-201ENST00000444542 271 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.21□□□□□ -2.22
LRRK2Q5S007 RPS29P20-201ENST00000489592 171 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 BOLA3P3-201ENST00000505182 232 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.21□□□□□ -2.22
LRRK2Q5S007 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.21□□□□□ -2.22
LRRK2Q5S007 SNORA31.11-201ENST00000516528 139 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 RNU6-113P-201ENST00000516653 101 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 SUB1P4-201ENST00000566062 339 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LRRK2Q5S007 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
LRRK2Q5S007 XIAPP3-201ENST00000312918 795 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 MTND2P9-201ENST00000422293 931 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.21□□□□□ -2.22
LRRK2Q5S007 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.21□□□□□ -2.22
LRRK2Q5S007 MTCYBP12-201ENST00000440559 1134 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 HAUS1P1-201ENST00000505275 832 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 AC139103.1-201ENST00000534696 1030 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.21□□□□□ -2.22
LRRK2Q5S007 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
LRRK2Q5S007 AC013244.3-201ENST00000605614 388 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 AC017076.1-201ENST00000607613 578 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 AC083806.3-201ENST00000614016 455 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 AC009812.4-201ENST00000569134 1805 ntBASIC1.21□□□□□ -2.22
LRRK2Q5S007 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
LRRK2Q5S007 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
LRRK2Q5S007 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
LRRK2Q5S007 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
LRRK2Q5S007 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
LRRK2Q5S007 AL353718.1-201ENST00000451028 517 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.2□□□□□ -2.22
LRRK2Q5S007 AC090453.1-201ENST00000495560 436 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.2□□□□□ -2.22
LRRK2Q5S007 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.2□□□□□ -2.22
LRRK2Q5S007 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.2□□□□□ -2.22
LRRK2Q5S007 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.2□□□□□ -2.22
LRRK2Q5S007 AC087373.1-201ENST00000524920 491 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 OR4K8P-201ENST00000578842 1048 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.2□□□□□ -2.22
LRRK2Q5S007 RPL23AP78-201ENST00000599928 470 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 uc_338.12-201ENST00000616344 181 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 AC138649.5-201ENST00000637456 137 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 AL596028.1-201ENST00000326971 197 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 Y_RNA.258-201ENST00000364613 105 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 LINC01347-201ENST00000417964 355 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.2□□□□□ -2.22
LRRK2Q5S007 GTF2IP12-201ENST00000456547 356 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 SNX5P1-201ENST00000505757 1041 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 VTA1P2-201ENST00000520205 911 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 IMMP1LP2-201ENST00000552954 492 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 TRAV28-201ENST00000557548 323 ntBASIC1.2□□□□□ -2.22
LRRK2Q5S007 AL030996.1-201ENST00000411430 235 ntBASIC1.19□□□□□ -2.22
LRRK2Q5S007 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.19□□□□□ -2.22
LRRK2Q5S007 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.19□□□□□ -2.22
LRRK2Q5S007 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.19□□□□□ -2.22
LRRK2Q5S007 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.19□□□□□ -2.22
LRRK2Q5S007 RNU6-1132P-201ENST00000459214 107 ntBASIC1.19□□□□□ -2.22
LRRK2Q5S007 TRAV31-201ENST00000502780 342 ntBASIC1.19□□□□□ -2.22
LRRK2Q5S007 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.19□□□□□ -2.22
LRRK2Q5S007 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.19□□□□□ -2.22
LRRK2Q5S007 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.19□□□□□ -2.22
LRRK2Q5S007 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
LRRK2Q5S007 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
LRRK2Q5S007 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.19□□□□□ -2.22
LRRK2Q5S007 U8.1-201ENST00000362843 134 ntBASIC1.19□□□□□ -2.22
LRRK2Q5S007 Y_RNA.324-201ENST00000365165 102 ntBASIC1.19□□□□□ -2.22
LRRK2Q5S007 AL033519.2-201ENST00000403958 392 ntBASIC1.19□□□□□ -2.22
LRRK2Q5S007 WARS2P1-201ENST00000429678 537 ntBASIC1.19□□□□□ -2.22
LRRK2Q5S007 ZNF965P-201ENST00000432501 817 ntBASIC1.19□□□□□ -2.22
LRRK2Q5S007 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
LRRK2Q5S007 MTND4LP22-201ENST00000508209 276 ntBASIC1.19□□□□□ -2.22
LRRK2Q5S007 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.19□□□□□ -2.22
LRRK2Q5S007 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.19□□□□□ -2.22
LRRK2Q5S007 MIR3935-201ENST00000583472 104 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms