Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC022447.1-201ENST00000515358 464 ntBASIC3.63□□□□□ -1.83
USP41Q3LFD5 RNU6-798P-201ENST00000516912 103 ntBASIC3.63□□□□□ -1.83
USP41Q3LFD5 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.63□□□□□ -1.83
USP41Q3LFD5 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.63□□□□□ -1.83
USP41Q3LFD5 AP002453.2-201ENST00000533503 320 ntBASIC3.63□□□□□ -1.83
USP41Q3LFD5 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
USP41Q3LFD5 AC018630.1-201ENST00000541376 925 ntBASIC3.63□□□□□ -1.83
USP41Q3LFD5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.63□□□□□ -1.83
USP41Q3LFD5 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.63□□□□□ -1.83
USP41Q3LFD5 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.63□□□□□ -1.83
USP41Q3LFD5 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.63□□□□□ -1.83
USP41Q3LFD5 MIR3611-201ENST00000584484 83 ntBASIC3.63□□□□□ -1.83
USP41Q3LFD5 BNIP3P8-201ENST00000597863 560 ntBASIC3.63□□□□□ -1.83
USP41Q3LFD5 CKS1BP3-201ENST00000600888 237 ntBASIC3.63□□□□□ -1.83
USP41Q3LFD5 SEPT7P9-203ENST00000604116 343 ntBASIC3.63□□□□□ -1.83
USP41Q3LFD5 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.63□□□□□ -1.83
USP41Q3LFD5 AC068137.4-201ENST00000638485 296 ntBASIC3.63□□□□□ -1.83
USP41Q3LFD5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
USP41Q3LFD5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP41Q3LFD5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.63□□□□□ -1.83
USP41Q3LFD5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.63□□□□□ -1.83
USP41Q3LFD5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP41Q3LFD5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP41Q3LFD5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
USP41Q3LFD5 SNORA40.3-201ENST00000390964 122 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 RPL7P25-201ENST00000404151 721 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 Y_RNA.608-201ENST00000410647 95 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC078974.1-201ENST00000411597 223 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC096664.2-201ENST00000411843 406 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 HMGN1P14-201ENST00000412459 517 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.62□□□□□ -1.83
USP41Q3LFD5 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.62□□□□□ -1.83
USP41Q3LFD5 RPL21P32-201ENST00000419877 477 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.62□□□□□ -1.83
USP41Q3LFD5 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.62□□□□□ -1.83
USP41Q3LFD5 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
USP41Q3LFD5 SSXP1-201ENST00000453640 473 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 SNRPFP4-201ENST00000456366 242 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 MTCO2P18-201ENST00000457151 658 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.62□□□□□ -1.83
USP41Q3LFD5 TMED11P-201ENST00000479478 690 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC082651.2-201ENST00000496833 166 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC110794.1-201ENST00000505816 425 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC004062.1-201ENST00000509926 645 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.62□□□□□ -1.83
USP41Q3LFD5 GMPSP1-201ENST00000514075 579 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 RNU6-1073P-201ENST00000517182 106 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC022878.1-201ENST00000530684 149 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC109635.4-202ENST00000531666 412 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AL133271.1-201ENST00000538229 291 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC026333.2-201ENST00000542164 106 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC011602.1-201ENST00000546484 331 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC068790.3-201ENST00000602988 553 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC012150.2-201ENST00000621300 544 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC010149.2-201ENST00000637608 315 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
USP41Q3LFD5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC010733.2-201ENST00000589496 5702 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 AC093908.1-201ENST00000623125 8092 ntBASIC3.62□□□□□ -1.83
USP41Q3LFD5 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.62□□□□□ -1.83
USP41Q3LFD5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.62□□□□□ -1.83
USP41Q3LFD5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USP41Q3LFD5 AP001350.1-201ENST00000601906 1524 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 Y_RNA.359-201ENST00000365498 102 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 RNU2-37P-201ENST00000410695 177 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 HMGN1P24-201ENST00000412282 298 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 USP9YP13-201ENST00000417797 480 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 AL121871.1-201ENST00000443413 436 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 RAC1P7-201ENST00000445367 377 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 AL592447.1-201ENST00000447592 540 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 AC010401.1-201ENST00000463867 348 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 RAP1BP2-201ENST00000478270 544 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AL049830.2-201ENST00000480072 201 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AC092451.1-201ENST00000480211 153 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 RPL23AP55-201ENST00000498163 452 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 CBX3P3-201ENST00000508108 532 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 PHBP14-201ENST00000512887 367 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 APOOP4-201ENST00000513530 597 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms