Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC027673.1-201ENST00000456245 405 ntBASIC2.54□□□□□ -2
RFX4Q33E94 SETP11-201ENST00000473027 690 ntBASIC2.54□□□□□ -2
RFX4Q33E94 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.54□□□□□ -2
RFX4Q33E94 AC108729.1-201ENST00000487812 947 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC083906.5-201ENST00000503722 328 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC091951.3-201ENST00000504093 246 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.54□□□□□ -2
RFX4Q33E94 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.54□□□□□ -2
RFX4Q33E94 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.54□□□□□ -2
RFX4Q33E94 AC025881.1-201ENST00000518851 512 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.54□□□□□ -2
RFX4Q33E94 AP001372.4-201ENST00000524889 472 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AP002404.1-201ENST00000532005 451 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.54□□□□□ -2
RFX4Q33E94 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.54□□□□□ -2
RFX4Q33E94 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.54□□□□□ -2
RFX4Q33E94 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.54□□□□□ -2
RFX4Q33E94 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.54□□□□□ -2
RFX4Q33E94 AC090695.1-201ENST00000561269 1222 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AP005205.1-201ENST00000563503 508 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC022662.1-201ENST00000580252 331 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.54□□□□□ -2
RFX4Q33E94 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.54□□□□□ -2
RFX4Q33E94 AC012493.2-201ENST00000595083 291 ntBASIC2.54□□□□□ -2
RFX4Q33E94 DUXAP11-201ENST00000603858 526 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC106900.2-201ENST00000604994 317 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC006270.3-201ENST00000605967 1036 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.54□□□□□ -2
RFX4Q33E94 AC245297.2-201ENST00000610119 565 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC092106.3-201ENST00000611308 722 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AL050303.3-201ENST00000613704 284 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC013470.4-201ENST00000619978 986 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AP001002.2-201ENST00000625137 386 ntBASIC2.54□□□□□ -2
RFX4Q33E94 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.54□□□□□ -2
RFX4Q33E94 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.54□□□□□ -2
RFX4Q33E94 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.53□□□□□ -2
RFX4Q33E94 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.53□□□□□ -2
RFX4Q33E94 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.53□□□□□ -2
RFX4Q33E94 AL356473.1-201ENST00000406203 1408 ntBASIC2.53□□□□□ -2
RFX4Q33E94 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.53□□□□□ -2
RFX4Q33E94 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RFX4Q33E94 MIR422A-201ENST00000362286 90 ntBASIC2.53□□□□□ -2
RFX4Q33E94 MIR513B-201ENST00000385136 84 ntBASIC2.53□□□□□ -2
RFX4Q33E94 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RFX4Q33E94 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.53□□□□□ -2
RFX4Q33E94 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.53□□□□□ -2
RFX4Q33E94 MTCO2P5-201ENST00000422621 426 ntBASIC2.53□□□□□ -2
RFX4Q33E94 AL953862.1-201ENST00000423016 168 ntBASIC2.53□□□□□ -2
RFX4Q33E94 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.53□□□□□ -2
RFX4Q33E94 MTND5P14-201ENST00000441481 1267 ntBASIC2.53□□□□□ -2
RFX4Q33E94 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.53□□□□□ -2
RFX4Q33E94 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.53□□□□□ -2
RFX4Q33E94 AC002381.1-201ENST00000447049 280 ntBASIC2.53□□□□□ -2
RFX4Q33E94 ARPC3P5-201ENST00000448802 534 ntBASIC2.53□□□□□ -2
RFX4Q33E94 AC234775.1-201ENST00000454247 670 ntBASIC2.53□□□□□ -2
RFX4Q33E94 MTCO3P11-201ENST00000455103 774 ntBASIC2.53□□□□□ -2
RFX4Q33E94 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.53□□□□□ -2
RFX4Q33E94 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.53□□□□□ -2
RFX4Q33E94 HMGB1P36-201ENST00000487709 576 ntBASIC2.53□□□□□ -2
RFX4Q33E94 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.53□□□□□ -2
RFX4Q33E94 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.53□□□□□ -2
RFX4Q33E94 AC010587.2-201ENST00000511727 448 ntBASIC2.53□□□□□ -2
RFX4Q33E94 SNORA31.15-201ENST00000516771 132 ntBASIC2.53□□□□□ -2
RFX4Q33E94 HMGB1P41-201ENST00000520234 440 ntBASIC2.53□□□□□ -2
RFX4Q33E94 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.53□□□□□ -2
RFX4Q33E94 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.53□□□□□ -2
RFX4Q33E94 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.53□□□□□ -2
RFX4Q33E94 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.53□□□□□ -2
RFX4Q33E94 AGGF1P5-201ENST00000567900 919 ntBASIC2.53□□□□□ -2
RFX4Q33E94 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.53□□□□□ -2
RFX4Q33E94 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.53□□□□□ -2
RFX4Q33E94 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.53□□□□□ -2
RFX4Q33E94 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.53□□□□□ -2
RFX4Q33E94 AL031176.1-201ENST00000604554 466 ntBASIC2.53□□□□□ -2
RFX4Q33E94 AC012443.1-201ENST00000605605 231 ntBASIC2.53□□□□□ -2
RFX4Q33E94 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.53□□□□□ -2
RFX4Q33E94 AC009812.4-201ENST00000569134 1805 ntBASIC2.53□□□□□ -2
RFX4Q33E94 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.53□□□□□ -2
RFX4Q33E94 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.53□□□□□ -2.01
RFX4Q33E94 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.52□□□□□ -2.01
RFX4Q33E94 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFX4Q33E94 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFX4Q33E94 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RFX4Q33E94 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFX4Q33E94 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RFX4Q33E94 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFX4Q33E94 RNU6-28P-201ENST00000362378 107 ntBASIC2.52□□□□□ -2.01
RFX4Q33E94 RNU6-777P-201ENST00000364265 104 ntBASIC2.52□□□□□ -2.01
RFX4Q33E94 RNA5SP139-201ENST00000364340 117 ntBASIC2.52□□□□□ -2.01
RFX4Q33E94 Y_RNA.234-201ENST00000364409 97 ntBASIC2.52□□□□□ -2.01
RFX4Q33E94 RNU6-83P-201ENST00000384568 112 ntBASIC2.52□□□□□ -2.01
RFX4Q33E94 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RFX4Q33E94 SNORA48.5-201ENST00000391143 135 ntBASIC2.52□□□□□ -2.01
RFX4Q33E94 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RFX4Q33E94 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.52□□□□□ -2.01
RFX4Q33E94 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.52□□□□□ -2.01
RFX4Q33E94 MTCYBP38-201ENST00000417160 1123 ntBASIC2.52□□□□□ -2.01
RFX4Q33E94 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.52□□□□□ -2.01
RFX4Q33E94 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.52□□□□□ -2.01
RFX4Q33E94 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms