Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.03□□□□□ -1.92
SIX1Q15475 PCMTD1P2-201ENST00000565017 355 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX1Q15475 ROCK1P1-201ENST00000573767 549 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AC090615.1-201ENST00000577519 154 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AC006270.2-201ENST00000578523 652 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 MIR5004-201ENST00000579078 107 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AL590229.1-201ENST00000603497 542 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AC015871.2-201ENST00000603605 948 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AC092354.1-201ENST00000606057 376 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AC097468.3-201ENST00000607956 456 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.03□□□□□ -1.92
SIX1Q15475 AC090115.4-201ENST00000609970 188 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AC138649.5-201ENST00000637456 137 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
SIX1Q15475 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SIX1Q15475 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.93
SIX1Q15475 ZNF833P-201ENST00000424938 1494 ntBASIC3.03□□□□□ -1.93
SIX1Q15475 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.02□□□□□ -1.93
SIX1Q15475 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX1Q15475 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
SIX1Q15475 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SIX1Q15475 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX1Q15475 RNA5SP258-201ENST00000362750 119 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 RNU6-501P-201ENST00000364072 100 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 Y_RNA.234-201ENST00000364409 97 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 RNU6-744P-201ENST00000365557 107 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 RNU6-1316P-201ENST00000384242 108 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 RNU2-37P-201ENST00000410695 177 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX1Q15475 Z92545.1-201ENST00000411782 234 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX1Q15475 AC007390.1-201ENST00000415722 356 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 NPM1P11-201ENST00000417106 855 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX1Q15475 AC244098.2-201ENST00000422068 99 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX1Q15475 AL365338.1-201ENST00000422282 858 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 AC091390.3-201ENST00000426478 338 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 AC093151.1-201ENST00000427711 313 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 MTND1P30-201ENST00000441241 901 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 AC118469.1-201ENST00000442943 488 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 RPL7P52-201ENST00000449200 742 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX1Q15475 AL353691.1-201ENST00000451332 387 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX1Q15475 KATNBL1P6-201ENST00000453433 915 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX1Q15475 RN7SL504P-201ENST00000494496 287 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX1Q15475 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX1Q15475 AC006390.1-201ENST00000508068 283 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX1Q15475 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX1Q15475 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.02□□□□□ -1.93
SIX1Q15475 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX1Q15475 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX1Q15475 AC034159.1-201ENST00000513885 583 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX1Q15475 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.02□□□□□ -1.93
SIX1Q15475 SETP7-201ENST00000552169 453 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 ZNF192P1-203ENST00000565888 810 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX1Q15475 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SIX1Q15475 MIR544B-201ENST00000582372 78 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX1Q15475 MIR4506-201ENST00000584693 77 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 BNIP3P23-201ENST00000599655 511 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 AC006254.3-201ENST00000603353 884 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 AC112187.2-201ENST00000604345 283 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 AC004853.1-201ENST00000604902 698 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 BCRP9-201ENST00000605312 388 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SIX1Q15475 AC103710.4-201ENST00000609301 899 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 XIST_intron.1-201ENST00000619444 68 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX1Q15475 MIR6733-201ENST00000635723 61 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 AP003399.1-201ENST00000637534 361 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SIX1Q15475 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SIX1Q15475 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.02□□□□□ -1.93
SIX1Q15475 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SIX1Q15475 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
SIX1Q15475 AC092447.10-201ENST00000620607 1652 ntBASIC3.01□□□□□ -1.93
SIX1Q15475 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.01□□□□□ -1.93
SIX1Q15475 ELL2P3-201ENST00000457883 1602 ntBASIC3.01□□□□□ -1.93
SIX1Q15475 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SIX1Q15475 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.01□□□□□ -1.93
SIX1Q15475 AC244517.1-201ENST00000606030 2086 ntBASIC3.01□□□□□ -1.93
SIX1Q15475 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SIX1Q15475 AL161781.1-201ENST00000354277 403 ntBASIC3.01□□□□□ -1.93
SIX1Q15475 Y_RNA.97-201ENST00000363094 102 ntBASIC3.01□□□□□ -1.93
SIX1Q15475 DYNLT3P1-201ENST00000378574 347 ntBASIC3.01□□□□□ -1.93
SIX1Q15475 MT-TH-201ENST00000387441 69 ntBASIC3.01□□□□□ -1.93
SIX1Q15475 AC092447.6-201ENST00000414578 210 ntBASIC3.01□□□□□ -1.93
SIX1Q15475 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.01□□□□□ -1.93
SIX1Q15475 AL445669.1-201ENST00000426743 755 ntBASIC3.01□□□□□ -1.93
SIX1Q15475 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.01□□□□□ -1.93
SIX1Q15475 AC244035.1-201ENST00000430042 390 ntBASIC3.01□□□□□ -1.93
SIX1Q15475 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms