Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RNU2-15P-201ENST00000410692 191 ntBASIC3.21□□□□□ -1.9
PTCH1Q13635 AC079780.1-201ENST00000428259 207 ntBASIC3.21□□□□□ -1.9
PTCH1Q13635 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.21□□□□□ -1.9
PTCH1Q13635 AC106872.3-201ENST00000495104 446 ntBASIC3.21□□□□□ -1.9
PTCH1Q13635 MTND3P3-201ENST00000505004 126 ntBASIC3.21□□□□□ -1.9
PTCH1Q13635 AC010625.1-201ENST00000511296 403 ntBASIC3.21□□□□□ -1.9
PTCH1Q13635 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.21□□□□□ -1.9
PTCH1Q13635 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.21□□□□□ -1.9
PTCH1Q13635 AC092451.2-201ENST00000538746 658 ntBASIC3.21□□□□□ -1.9
PTCH1Q13635 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.21□□□□□ -1.9
PTCH1Q13635 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.21□□□□□ -1.9
PTCH1Q13635 AC009220.3-201ENST00000604318 586 ntBASIC3.21□□□□□ -1.9
PTCH1Q13635 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.21□□□□□ -1.9
PTCH1Q13635 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.21□□□□□ -1.9
PTCH1Q13635 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PTCH1Q13635 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.21□□□□□ -1.9
PTCH1Q13635 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.21□□□□□ -1.9
PTCH1Q13635 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.2□□□□□ -1.9
PTCH1Q13635 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.2□□□□□ -1.9
PTCH1Q13635 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTCH1Q13635 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PTCH1Q13635 Y_RNA.508-201ENST00000384502 114 ntBASIC3.2□□□□□ -1.9
PTCH1Q13635 MIR217-201ENST00000384817 110 ntBASIC3.2□□□□□ -1.9
PTCH1Q13635 AC092634.6-201ENST00000418558 192 ntBASIC3.2□□□□□ -1.9
PTCH1Q13635 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.2□□□□□ -1.9
PTCH1Q13635 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.2□□□□□ -1.9
PTCH1Q13635 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.2□□□□□ -1.9
PTCH1Q13635 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.2□□□□□ -1.9
PTCH1Q13635 AC007677.1-201ENST00000445757 515 ntBASIC3.2□□□□□ -1.9
PTCH1Q13635 MRPL42P4-201ENST00000453267 443 ntBASIC3.2□□□□□ -1.9
PTCH1Q13635 RN7SKP210-201ENST00000459176 261 ntBASIC3.2□□□□□ -1.9
PTCH1Q13635 MTND4LP22-201ENST00000508209 276 ntBASIC3.2□□□□□ -1.9
PTCH1Q13635 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTCH1Q13635 AC026412.2-201ENST00000512270 1075 ntBASIC3.2□□□□□ -1.9
PTCH1Q13635 RNU6-1095P-201ENST00000516148 108 ntBASIC3.2□□□□□ -1.9
PTCH1Q13635 SNORA48.10-201ENST00000516965 160 ntBASIC3.2□□□□□ -1.9
PTCH1Q13635 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.2□□□□□ -1.9
PTCH1Q13635 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.2□□□□□ -1.9
PTCH1Q13635 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.2□□□□□ -1.9
PTCH1Q13635 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.2□□□□□ -1.9
PTCH1Q13635 AC120053.1-201ENST00000607706 736 ntBASIC3.2□□□□□ -1.9
PTCH1Q13635 AC018926.1-201ENST00000616335 435 ntBASIC3.2□□□□□ -1.9
PTCH1Q13635 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.2□□□□□ -1.9
PTCH1Q13635 Y_RNA.118-201ENST00000363300 101 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 SNORA25.6-201ENST00000364121 118 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 SNORA26.9-201ENST00000391322 122 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 FAT1P1-201ENST00000406588 507 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 MTCO1P23-201ENST00000415223 1526 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 UBE2D3P2-201ENST00000424409 445 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 SAR1AP4-201ENST00000429225 591 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 AL445669.2-201ENST00000454425 421 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 AC104308.1-201ENST00000454621 333 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 Z99496.1-201ENST00000469424 1477 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 RPS27P27-201ENST00000498779 255 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.19□□□□□ -1.9
PTCH1Q13635 AC112206.4-201ENST00000515142 405 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 SNORD59.2-201ENST00000516873 68 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 RNU6-295P-201ENST00000516901 104 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.19□□□□□ -1.9
PTCH1Q13635 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.19□□□□□ -1.9
PTCH1Q13635 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.19□□□□□ -1.9
PTCH1Q13635 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTCH1Q13635 MTCYBP20-201ENST00000524239 1129 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PTCH1Q13635 AC090666.1-201ENST00000578241 445 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 VN1R87P-201ENST00000596706 487 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 AC099778.2-201ENST00000610904 211 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PTCH1Q13635 AC253576.2-201ENST00000618815 580 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.19□□□□□ -1.9
PTCH1Q13635 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.19□□□□□ -1.9
PTCH1Q13635 AC006927.2-201ENST00000639256 389 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 AC110774.1-201ENST00000623567 2018 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PTCH1Q13635 Y_RNA.796-201ENST00000364268 102 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 Y_RNA.799-201ENST00000364992 102 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 RNA5SP88-201ENST00000365560 109 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 SNORD51-201ENST00000384320 80 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 RNU6-1300P-201ENST00000391046 108 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 RPL7P27-201ENST00000403775 720 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 RNU6-1077P-201ENST00000410506 102 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.19□□□□□ -1.9
PTCH1Q13635 ATG3P1-201ENST00000419507 911 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 AC233728.2-201ENST00000425348 757 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 AL589880.1-201ENST00000448271 287 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTCH1Q13635 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.19□□□□□ -1.9
PTCH1Q13635 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.19□□□□□ -1.9
PTCH1Q13635 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.19□□□□□ -1.9
PTCH1Q13635 OR4R2P-201ENST00000530815 597 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.19□□□□□ -1.9
PTCH1Q13635 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.19□□□□□ -1.9
PTCH1Q13635 AC122134.1-202ENST00000569111 1201 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.19□□□□□ -1.9
PTCH1Q13635 AL035411.2-201ENST00000604022 421 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 MIR6766-201ENST00000622641 72 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 SNORA50A-202ENST00000629536 136 ntBASIC3.19□□□□□ -1.9
PTCH1Q13635 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PTCH1Q13635 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms