Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 OR4P1P-201ENST00000530808 1136 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 COX6CP3-201ENST00000580869 223 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC245036.5-201ENST00000596330 847 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 AL049779.4-201ENST00000604500 156 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC007621.1-201ENST00000604544 437 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC024933.1-201ENST00000608472 348 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 AL353748.2-201ENST00000622148 471 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC010297.1-201ENST00000623948 149 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 CYP3A51P-201ENST00000633513 256 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC099654.9-201ENST00000637055 678 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 U6.101-201ENST00000637707 76 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC107982.1-201ENST00000507171 1300 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMARCB1Q12824 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 RNU6-216P-201ENST00000363282 104 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 RNU6-301P-201ENST00000384277 107 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 MIR506-201ENST00000384998 124 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 HMGN2P30-201ENST00000423237 256 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 MTCO2P23-201ENST00000425216 680 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 RPL36AP6-201ENST00000435770 321 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 USP9YP22-201ENST00000438971 294 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 AL009048.1-201ENST00000450437 298 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 USP9YP34-201ENST00000453983 808 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 snoU109.3-201ENST00000459477 145 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 AC128713.1-201ENST00000471495 306 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 RPL9P33-201ENST00000484311 566 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 KLRA1P-201ENST00000503499 986 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 AC010460.2-201ENST00000509054 677 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 MTATP6P9-201ENST00000515039 680 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 RNA5SP320-201ENST00000516263 124 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 ERHP1-201ENST00000523006 310 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 OR10V3P-201ENST00000525712 725 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 EEF1B2P4-201ENST00000551398 348 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 AC020895.1-201ENST00000595362 272 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 AC128687.1-201ENST00000605304 619 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 AL157392.4-201ENST00000609756 345 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 AC005332.6-201ENST00000613178 446 ntBASIC2.68□□□□□ -1.98
SMARCB1Q12824 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.68□□□□□ -1.98
SMARCB1Q12824 AC244517.1-201ENST00000606030 2086 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SMARCB1Q12824 Y_RNA.25-201ENST00000362528 102 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 RNA5SP456-201ENST00000364002 114 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 RNA5SP139-201ENST00000364340 117 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 SNORD116.1-201ENST00000365628 92 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 RNU6-1242P-201ENST00000391052 103 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 SNRPEP2-201ENST00000397592 279 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 DHFRP6-201ENST00000401776 268 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 AL356320.2-201ENST00000417263 507 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 MRPS36P1-201ENST00000421291 307 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 AL035407.1-201ENST00000429211 571 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 AC004854.1-201ENST00000440356 349 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 RPL39P6-201ENST00000448289 150 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 AP000705.1-201ENST00000454567 350 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 PNPLA4P1-201ENST00000458328 305 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 RPS15AP17-201ENST00000470598 390 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 AP000852.1-201ENST00000472460 573 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 AC096751.1-202ENST00000502691 1067 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 UBE2V1P12-201ENST00000503954 474 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 AC114322.1-201ENST00000506771 926 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 RNY4P37-201ENST00000516225 96 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 AL512310.1-201ENST00000548639 172 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 HIGD1AP17-201ENST00000554576 276 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms