Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC073264.1-201ENST00000411508 416 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGXB3Q12766 AC022022.1-201ENST00000430304 178 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGXB3Q12766 MTCO2P9-201ENST00000503214 694 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 SNX5P1-201ENST00000505757 1041 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 MTCO1P30-201ENST00000515244 580 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 SMARCE1P4-201ENST00000523647 241 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 AP001804.3-201ENST00000525146 880 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGXB3Q12766 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGXB3Q12766 AL163153.1-201ENST00000554223 283 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 FAM106DP-201ENST00000586416 501 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 YWHAQP7-201ENST00000603536 658 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 AC113368.1-201ENST00000603736 382 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGXB3Q12766 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGXB3Q12766 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HMGXB3Q12766 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
HMGXB3Q12766 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.37□□□□□ -2.03
HMGXB3Q12766 UBE2V1P13-201ENST00000436983 439 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 HMGB1P26-201ENST00000452520 628 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 AC006270.2-201ENST00000578523 652 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 AC011468.4-201ENST00000603942 409 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HMGXB3Q12766 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HMGXB3Q12766 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGXB3Q12766 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGXB3Q12766 MIR548J-201ENST00000408833 112 ntBASIC2.36□□□□□ -2.03
HMGXB3Q12766 RPS15AP7-201ENST00000439294 405 ntBASIC2.36□□□□□ -2.03
HMGXB3Q12766 AC096992.1-201ENST00000459808 709 ntBASIC2.36□□□□□ -2.03
HMGXB3Q12766 RPPH1-2P-201ENST00000516688 293 ntBASIC2.36□□□□□ -2.03
HMGXB3Q12766 AP004607.1-201ENST00000524456 203 ntBASIC2.36□□□□□ -2.03
HMGXB3Q12766 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGXB3Q12766 MIR4278-201ENST00000636094 69 ntBASIC2.36□□□□□ -2.03
HMGXB3Q12766 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.36□□□□□ -2.03
HMGXB3Q12766 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGXB3Q12766 FABP5P3-201ENST00000437960 408 ntBASIC2.35□□□□□ -2.03
HMGXB3Q12766 RPS15AP1-201ENST00000457423 391 ntBASIC2.35□□□□□ -2.03
HMGXB3Q12766 SUMO2P6-201ENST00000505273 288 ntBASIC2.35□□□□□ -2.03
HMGXB3Q12766 Y_RNA.675-201ENST00000516389 149 ntBASIC2.35□□□□□ -2.03
HMGXB3Q12766 RNA5SP82-201ENST00000516707 92 ntBASIC2.35□□□□□ -2.03
HMGXB3Q12766 RN7SKP5-201ENST00000517045 272 ntBASIC2.35□□□□□ -2.03
HMGXB3Q12766 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.35□□□□□ -2.03
HMGXB3Q12766 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGXB3Q12766 AC011712.1-201ENST00000588959 234 ntBASIC2.35□□□□□ -2.03
HMGXB3Q12766 AL391646.1-201ENST00000603860 190 ntBASIC2.35□□□□□ -2.03
HMGXB3Q12766 AC016727.2-201ENST00000603988 621 ntBASIC2.35□□□□□ -2.03
HMGXB3Q12766 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
HMGXB3Q12766 MTND1P18-201ENST00000448191 573 ntBASIC2.34□□□□□ -2.03
HMGXB3Q12766 MTND3P6-201ENST00000485242 339 ntBASIC2.34□□□□□ -2.03
HMGXB3Q12766 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.34□□□□□ -2.03
HMGXB3Q12766 AC008427.1-201ENST00000503102 655 ntBASIC2.34□□□□□ -2.03
HMGXB3Q12766 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGXB3Q12766 NPM1P52-201ENST00000518264 846 ntBASIC2.34□□□□□ -2.03
HMGXB3Q12766 MIR4285-201ENST00000581001 85 ntBASIC2.34□□□□□ -2.03
HMGXB3Q12766 AC007229.1-201ENST00000590455 412 ntBASIC2.34□□□□□ -2.03
HMGXB3Q12766 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGXB3Q12766 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGXB3Q12766 AC004241.3-201ENST00000611728 517 ntBASIC2.34□□□□□ -2.03
HMGXB3Q12766 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGXB3Q12766 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
HMGXB3Q12766 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.33□□□□□ -2.04
HMGXB3Q12766 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMGXB3Q12766 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HMGXB3Q12766 AC009965.2-201ENST00000425328 970 ntBASIC2.33□□□□□ -2.04
HMGXB3Q12766 SUMO1P4-201ENST00000429430 302 ntBASIC2.33□□□□□ -2.04
HMGXB3Q12766 GTF2IP7-202ENST00000436677 309 ntBASIC2.33□□□□□ -2.04
HMGXB3Q12766 OR4V1P-201ENST00000525394 1140 ntBASIC2.33□□□□□ -2.04
HMGXB3Q12766 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGXB3Q12766 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.33□□□□□ -2.04
HMGXB3Q12766 AL161722.3-201ENST00000605789 2983 ntBASIC2.33□□□□□ -2.04
HMGXB3Q12766 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGXB3Q12766 AL136164.4-201ENST00000625013 2135 ntBASIC2.33□□□□□ -2.04
HMGXB3Q12766 MKKS-204ENST00000639674 192 ntBASIC2.33□□□□□ -2.04
HMGXB3Q12766 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMGXB3Q12766 AL445183.3-201ENST00000414168 502 ntBASIC2.32□□□□□ -2.04
HMGXB3Q12766 SNORD108-201ENST00000459332 71 ntBASIC2.32□□□□□ -2.04
HMGXB3Q12766 AC096571.1-202ENST00000506634 735 ntBASIC2.32□□□□□ -2.04
HMGXB3Q12766 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGXB3Q12766 AC068135.2-201ENST00000569293 1028 ntBASIC2.32□□□□□ -2.04
HMGXB3Q12766 AC005730.3-201ENST00000583067 366 ntBASIC2.32□□□□□ -2.04
HMGXB3Q12766 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HMGXB3Q12766 RNA5SP295-201ENST00000362655 121 ntBASIC2.32□□□□□ -2.04
HMGXB3Q12766 SNORD114-27-201ENST00000363766 70 ntBASIC2.32□□□□□ -2.04
HMGXB3Q12766 RNA5SP492-201ENST00000411330 114 ntBASIC2.32□□□□□ -2.04
HMGXB3Q12766 RPS29P20-201ENST00000489592 171 ntBASIC2.32□□□□□ -2.04
HMGXB3Q12766 AC022634.1-201ENST00000520765 532 ntBASIC2.32□□□□□ -2.04
HMGXB3Q12766 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGXB3Q12766 AC007115.1-201ENST00000546853 234 ntBASIC2.32□□□□□ -2.04
HMGXB3Q12766 AL161713.1-201ENST00000555538 145 ntBASIC2.32□□□□□ -2.04
HMGXB3Q12766 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
HMGXB3Q12766 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.31□□□□□ -2.04
HMGXB3Q12766 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HMGXB3Q12766 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.31□□□□□ -2.04
HMGXB3Q12766 RNA5SP393-201ENST00000363423 117 ntBASIC2.31□□□□□ -2.04
HMGXB3Q12766 AL033519.2-201ENST00000403958 392 ntBASIC2.31□□□□□ -2.04
HMGXB3Q12766 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.31□□□□□ -2.04
HMGXB3Q12766 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms