Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3□□□□□ -1.93
COL16A1Q07092 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3□□□□□ -1.93
COL16A1Q07092 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3□□□□□ -1.93
COL16A1Q07092 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3□□□□□ -1.93
COL16A1Q07092 AP001207.1-201ENST00000524051 481 ntBASIC3□□□□□ -1.93
COL16A1Q07092 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3□□□□□ -1.93
COL16A1Q07092 MIR3912-201ENST00000577566 105 ntBASIC3□□□□□ -1.93
COL16A1Q07092 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3□□□□□ -1.93
COL16A1Q07092 AC022662.1-201ENST00000580252 331 ntBASIC3□□□□□ -1.93
COL16A1Q07092 AC015688.2-201ENST00000584523 262 ntBASIC3□□□□□ -1.93
COL16A1Q07092 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3□□□□□ -1.93
COL16A1Q07092 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3□□□□□ -1.93
COL16A1Q07092 AC139769.3-201ENST00000618383 175 ntBASIC3□□□□□ -1.93
COL16A1Q07092 AC007490.1-201ENST00000624321 703 ntBASIC3□□□□□ -1.93
COL16A1Q07092 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL16A1Q07092 BX005019.1-201ENST00000561881 1810 ntBASIC2.99□□□□□ -1.93
COL16A1Q07092 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.99□□□□□ -1.93
COL16A1Q07092 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL16A1Q07092 AL139276.1-201ENST00000311910 1001 ntBASIC2.99□□□□□ -1.93
COL16A1Q07092 SNORD113-6-201ENST00000363345 75 ntBASIC2.99□□□□□ -1.93
COL16A1Q07092 RNU6-560P-201ENST00000364007 108 ntBASIC2.99□□□□□ -1.93
COL16A1Q07092 DNAJC19P6-201ENST00000401853 280 ntBASIC2.99□□□□□ -1.93
COL16A1Q07092 TAF13P2-201ENST00000416876 286 ntBASIC2.99□□□□□ -1.93
COL16A1Q07092 ELOCP9-201ENST00000418624 239 ntBASIC2.99□□□□□ -1.93
COL16A1Q07092 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.99□□□□□ -1.93
COL16A1Q07092 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.99□□□□□ -1.93
COL16A1Q07092 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.99□□□□□ -1.93
COL16A1Q07092 SEPT14P24-201ENST00000447236 180 ntBASIC2.99□□□□□ -1.93
COL16A1Q07092 AC009961.3-201ENST00000449832 765 ntBASIC2.99□□□□□ -1.93
COL16A1Q07092 RPL31P3-201ENST00000458430 332 ntBASIC2.99□□□□□ -1.93
COL16A1Q07092 RPS27P29-201ENST00000463110 252 ntBASIC2.99□□□□□ -1.93
COL16A1Q07092 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.99□□□□□ -1.93
COL16A1Q07092 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL16A1Q07092 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.99□□□□□ -1.93
COL16A1Q07092 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.99□□□□□ -1.93
COL16A1Q07092 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.99□□□□□ -1.93
COL16A1Q07092 AC090888.1-201ENST00000561335 1141 ntBASIC2.99□□□□□ -1.93
COL16A1Q07092 AC055876.1-202ENST00000567053 138 ntBASIC2.99□□□□□ -1.93
COL16A1Q07092 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.99□□□□□ -1.93
COL16A1Q07092 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.99□□□□□ -1.93
COL16A1Q07092 AC245297.2-201ENST00000610119 565 ntBASIC2.99□□□□□ -1.93
COL16A1Q07092 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL16A1Q07092 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
COL16A1Q07092 AC111188.2-201ENST00000529697 1387 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL16A1Q07092 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
COL16A1Q07092 AC009302.1-201ENST00000417147 390 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.98□□□□□ -1.93
COL16A1Q07092 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.98□□□□□ -1.93
COL16A1Q07092 RWDD4P2-201ENST00000426392 563 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 RAC1P8-201ENST00000427086 527 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 AC092393.1-201ENST00000439625 742 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 AC002542.1-201ENST00000440683 193 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 MTCO2P7-201ENST00000446518 666 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 AC092754.2-201ENST00000463506 460 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 RAP1BP2-201ENST00000478270 544 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 AP000926.1-201ENST00000479573 241 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.98□□□□□ -1.93
COL16A1Q07092 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.98□□□□□ -1.93
COL16A1Q07092 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.98□□□□□ -1.93
COL16A1Q07092 AC021146.8-201ENST00000507455 733 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.98□□□□□ -1.93
COL16A1Q07092 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.98□□□□□ -1.93
COL16A1Q07092 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.98□□□□□ -1.93
COL16A1Q07092 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.98□□□□□ -1.93
COL16A1Q07092 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.98□□□□□ -1.93
COL16A1Q07092 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.98□□□□□ -1.93
COL16A1Q07092 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.98□□□□□ -1.93
COL16A1Q07092 FAM106CP-201ENST00000582212 507 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 AC119751.7-201ENST00000600494 245 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 AL020997.3-201ENST00000602843 359 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 AC011374.2-201ENST00000607135 526 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 AC090425.2-201ENST00000608818 501 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 AL450489.1-201ENST00000612071 468 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.98□□□□□ -1.93
COL16A1Q07092 AC024595.1-201ENST00000623088 387 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
COL16A1Q07092 AC000367.1-201ENST00000452711 1766 ntBASIC2.98□□□□□ -1.93
COL16A1Q07092 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL16A1Q07092 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL16A1Q07092 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
COL16A1Q07092 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
COL16A1Q07092 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
COL16A1Q07092 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL16A1Q07092 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
COL16A1Q07092 SNORA62.2-201ENST00000364672 152 ntBASIC2.97□□□□□ -1.93
COL16A1Q07092 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.97□□□□□ -1.93
COL16A1Q07092 Y_RNA.560-201ENST00000384689 102 ntBASIC2.97□□□□□ -1.93
COL16A1Q07092 MIR525-201ENST00000384978 85 ntBASIC2.97□□□□□ -1.93
COL16A1Q07092 RNU6-192P-201ENST00000391253 100 ntBASIC2.97□□□□□ -1.93
COL16A1Q07092 AL031779.1-201ENST00000415663 330 ntBASIC2.97□□□□□ -1.93
COL16A1Q07092 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.97□□□□□ -1.93
COL16A1Q07092 AL360221.1-201ENST00000445989 335 ntBASIC2.97□□□□□ -1.93
COL16A1Q07092 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.97□□□□□ -1.93
COL16A1Q07092 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.97□□□□□ -1.93
COL16A1Q07092 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL16A1Q07092 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.97□□□□□ -1.93
COL16A1Q07092 AC008494.2-201ENST00000514544 370 ntBASIC2.97□□□□□ -1.93
COL16A1Q07092 RNA5SP200-201ENST00000516360 103 ntBASIC2.97□□□□□ -1.93
COL16A1Q07092 snoZ278.1-201ENST00000517059 112 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms