Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 NDUFB4P6-201ENST00000436819 366 ntBASIC1.34□□□□□ -2.19
SSBP1Q04837 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.34□□□□□ -2.19
SSBP1Q04837 AL831737.1-201ENST00000441288 271 ntBASIC1.34□□□□□ -2.19
SSBP1Q04837 AC097499.1-201ENST00000444277 208 ntBASIC1.34□□□□□ -2.19
SSBP1Q04837 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
SSBP1Q04837 AC004022.1-201ENST00000447766 1066 ntBASIC1.34□□□□□ -2.19
SSBP1Q04837 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.34□□□□□ -2.19
SSBP1Q04837 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.34□□□□□ -2.19
SSBP1Q04837 AL672167.3-201ENST00000465951 960 ntBASIC1.34□□□□□ -2.19
SSBP1Q04837 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.34□□□□□ -2.19
SSBP1Q04837 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.34□□□□□ -2.19
SSBP1Q04837 AL442163.2-201ENST00000553912 710 ntBASIC1.34□□□□□ -2.19
SSBP1Q04837 AC110588.1-201ENST00000559699 137 ntBASIC1.34□□□□□ -2.19
SSBP1Q04837 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.34□□□□□ -2.19
SSBP1Q04837 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.34□□□□□ -2.19
SSBP1Q04837 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.34□□□□□ -2.19
SSBP1Q04837 AL160281.1-201ENST00000605307 311 ntBASIC1.34□□□□□ -2.19
SSBP1Q04837 OR10AB1P-201ENST00000609613 938 ntBASIC1.34□□□□□ -2.19
SSBP1Q04837 AC005332.10-201ENST00000612725 619 ntBASIC1.34□□□□□ -2.19
SSBP1Q04837 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.34□□□□□ -2.19
SSBP1Q04837 AP005212.4-201ENST00000614206 710 ntBASIC1.34□□□□□ -2.19
SSBP1Q04837 AC025588.4-201ENST00000615802 908 ntBASIC1.34□□□□□ -2.19
SSBP1Q04837 AL353748.2-201ENST00000622148 471 ntBASIC1.34□□□□□ -2.19
SSBP1Q04837 AC027309.3-201ENST00000623419 351 ntBASIC1.34□□□□□ -2.19
SSBP1Q04837 AL137003.2-201ENST00000606924 2538 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 AP006437.1-201ENST00000641440 3685 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SSBP1Q04837 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SSBP1Q04837 RNU6-386P-201ENST00000362650 107 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 RNU1-42P-201ENST00000364033 160 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 Z98749.2-208ENST00000381646 500 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 U3.29-201ENST00000391296 212 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 SSXP10-201ENST00000402595 565 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.33□□□□□ -2.2
SSBP1Q04837 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.33□□□□□ -2.2
SSBP1Q04837 AL445669.1-201ENST00000426743 755 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 AL451062.2-201ENST00000427515 271 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 AC003989.2-201ENST00000440224 169 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 AC107626.1-201ENST00000471084 183 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 AC023790.1-201ENST00000482174 347 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 AC105252.1-201ENST00000503089 286 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.33□□□□□ -2.2
SSBP1Q04837 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.33□□□□□ -2.2
SSBP1Q04837 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SSBP1Q04837 Y_RNA.675-201ENST00000516389 149 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 EEF1A1P37-201ENST00000522748 715 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 ATP5F1P5-201ENST00000526403 760 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 EIF4EP5-201ENST00000528228 640 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 AC118942.1-201ENST00000529674 1035 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 CBX3P4-201ENST00000538909 354 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 AC018630.1-201ENST00000541376 925 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.33□□□□□ -2.2
SSBP1Q04837 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.33□□□□□ -2.2
SSBP1Q04837 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.33□□□□□ -2.2
SSBP1Q04837 AC011471.1-201ENST00000585766 187 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 AC005229.3-201ENST00000603438 323 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 AC002487.1-201ENST00000604565 994 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 DPRXP5-201ENST00000604662 539 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 AP005137.2-201ENST00000609238 400 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 AC079395.3-201ENST00000615161 484 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.33□□□□□ -2.2
SSBP1Q04837 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
SSBP1Q04837 MTND5P29-201ENST00000458676 1807 ntBASIC1.33□□□□□ -2.2
SSBP1Q04837 CDC27P3-201ENST00000635418 1910 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 AL022578.1-201ENST00000439330 1433 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.32□□□□□ -2.2
SSBP1Q04837 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.32□□□□□ -2.2
SSBP1Q04837 RPS3AP24-201ENST00000407896 734 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.32□□□□□ -2.2
SSBP1Q04837 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.32□□□□□ -2.2
SSBP1Q04837 ARPC3P1-201ENST00000437218 533 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 OSTCP8-201ENST00000445117 448 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.32□□□□□ -2.2
SSBP1Q04837 BX248409.1-201ENST00000455497 255 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 ANKRD26P4-201ENST00000455755 950 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 FO393415.2-201ENST00000480085 343 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 MTCYBP17-201ENST00000503579 789 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.32□□□□□ -2.2
SSBP1Q04837 SNORA70.16-201ENST00000516390 95 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 AC068339.2-201ENST00000534395 618 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.32□□□□□ -2.2
SSBP1Q04837 AC103710.4-201ENST00000609301 899 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.32□□□□□ -2.2
SSBP1Q04837 AC090116.1-201ENST00000615679 446 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 AC025016.1-201ENST00000616746 682 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
SSBP1Q04837 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SSBP1Q04837 NUP58P1-201ENST00000502546 1738 ntBASIC1.32□□□□□ -2.2
SSBP1Q04837 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.31□□□□□ -2.2
SSBP1Q04837 RNU4-42P-201ENST00000364738 142 ntBASIC1.31□□□□□ -2.2
SSBP1Q04837 SNORA11B-201ENST00000408175 129 ntBASIC1.31□□□□□ -2.2
SSBP1Q04837 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.31□□□□□ -2.2
SSBP1Q04837 EZH2P1-201ENST00000431167 291 ntBASIC1.31□□□□□ -2.2
SSBP1Q04837 AL139415.2-201ENST00000431968 163 ntBASIC1.31□□□□□ -2.2
SSBP1Q04837 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.31□□□□□ -2.2
SSBP1Q04837 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.31□□□□□ -2.2
SSBP1Q04837 MTCYBP3-201ENST00000445588 1137 ntBASIC1.31□□□□□ -2.2
SSBP1Q04837 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.31□□□□□ -2.2
SSBP1Q04837 MRPL35P4-201ENST00000453682 566 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms