Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
HIST1H1AQ02539 RNU6-441P-201ENST00000384545 106 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 MIR676-201ENST00000390702 67 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 SUMO2P12-201ENST00000405924 140 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 MIR1290-201ENST00000408735 78 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 RNU4-53P-201ENST00000410828 140 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 EIF4EP4-201ENST00000424916 578 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.59□□□□□ -2.15
HIST1H1AQ02539 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
HIST1H1AQ02539 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.59□□□□□ -2.15
HIST1H1AQ02539 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.59□□□□□ -2.15
HIST1H1AQ02539 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.59□□□□□ -2.15
HIST1H1AQ02539 RPS20P24-201ENST00000457473 361 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 KATNBL1P4-201ENST00000503545 918 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 RNU6-1095P-201ENST00000516148 108 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 RNU1-103P-201ENST00000516502 125 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 SCARNA16.3-201ENST00000516595 184 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 RNU6-928P-201ENST00000516876 104 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 SNORA48.10-201ENST00000516965 160 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 RNU2-19P-201ENST00000517288 84 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.59□□□□□ -2.15
HIST1H1AQ02539 AC027309.2-201ENST00000520566 192 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.59□□□□□ -2.15
HIST1H1AQ02539 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.59□□□□□ -2.15
HIST1H1AQ02539 AC068135.2-201ENST00000569293 1028 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 MIR3921-201ENST00000577308 85 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.59□□□□□ -2.15
HIST1H1AQ02539 MIR5002-201ENST00000584713 97 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
HIST1H1AQ02539 AC021749.1-201ENST00000604322 607 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 AC025588.2-201ENST00000604851 466 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 AC068722.2-201ENST00000618734 544 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 AC010872.1-201ENST00000624225 675 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 AL109659.3-201ENST00000624985 950 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 AL356118.1-201ENST00000635272 1078 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 AC080128.1-201ENST00000474389 1917 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
HIST1H1AQ02539 AC011477.1-204ENST00000623416 1325 ntBASIC1.59□□□□□ -2.16
HIST1H1AQ02539 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
HIST1H1AQ02539 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 RNA5SP270-201ENST00000411361 118 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 RPL17P12-201ENST00000413391 526 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 FCF1P2-201ENST00000415284 583 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 RPL35AP22-201ENST00000436855 335 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 AC092685.1-201ENST00000447960 1243 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 AC104073.1-201ENST00000451988 151 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 snoU109.4-201ENST00000458953 143 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 AC072039.1-201ENST00000477611 581 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 VPS26AP1-201ENST00000483197 979 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 AC096571.1-202ENST00000506634 735 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 AC118465.1-201ENST00000513820 1271 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 AP003122.3-201ENST00000526316 255 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 AC011374.2-201ENST00000607135 526 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 SCARNA15.3-201ENST00000626315 122 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 SCARNA4.1-201ENST00000628597 123 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 IGHVIII-44-202ENST00000636235 289 ntBASIC1.58□□□□□ -2.16
HIST1H1AQ02539 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
HIST1H1AQ02539 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 PTP4A1P7-201ENST00000423476 514 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC010881.1-201ENST00000433830 235 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 MTND4LP10-201ENST00000435146 291 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC016691.1-201ENST00000441321 413 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AL118520.1-201ENST00000450770 291 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC104164.3-201ENST00000467363 1258 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC026801.1-201ENST00000497178 464 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC105252.1-201ENST00000503089 286 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC069306.1-201ENST00000507006 843 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AL359273.1-201ENST00000510918 627 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC093770.1-201ENST00000511559 571 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 RNU6-798P-201ENST00000516912 103 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms