Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AL590240.1-201ENST00000334118 313 ntBASIC4.58□□□□□ -1.68
YBX1P67809 RNU6-490P-201ENST00000362985 107 ntBASIC4.58□□□□□ -1.68
YBX1P67809 RNU6-960P-201ENST00000364056 120 ntBASIC4.58□□□□□ -1.68
YBX1P67809 Y_RNA.307-201ENST00000365022 117 ntBASIC4.58□□□□□ -1.68
YBX1P67809 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
YBX1P67809 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
YBX1P67809 Y_RNA.496-201ENST00000384444 101 ntBASIC4.58□□□□□ -1.68
YBX1P67809 RNU6-1127P-201ENST00000384580 107 ntBASIC4.58□□□□□ -1.68
YBX1P67809 RNU6-387P-201ENST00000411331 105 ntBASIC4.58□□□□□ -1.68
YBX1P67809 AL590139.1-201ENST00000416267 400 ntBASIC4.58□□□□□ -1.68
YBX1P67809 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.58□□□□□ -1.68
YBX1P67809 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.58□□□□□ -1.68
YBX1P67809 AC236972.1-201ENST00000433225 199 ntBASIC4.58□□□□□ -1.68
YBX1P67809 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.58□□□□□ -1.68
YBX1P67809 MTND2P29-201ENST00000438595 412 ntBASIC4.58□□□□□ -1.68
YBX1P67809 SUMO1P3-201ENST00000439961 304 ntBASIC4.58□□□□□ -1.68
YBX1P67809 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.58□□□□□ -1.68
YBX1P67809 HMGB3P21-201ENST00000452483 547 ntBASIC4.58□□□□□ -1.68
YBX1P67809 AC079168.2-201ENST00000453977 416 ntBASIC4.58□□□□□ -1.68
YBX1P67809 CYCSP34-201ENST00000458172 304 ntBASIC4.58□□□□□ -1.68
YBX1P67809 SNORD97-201ENST00000459187 142 ntBASIC4.58□□□□□ -1.68
YBX1P67809 FTH1P24-201ENST00000503502 462 ntBASIC4.58□□□□□ -1.68
YBX1P67809 Y_RNA.670-201ENST00000516255 105 ntBASIC4.58□□□□□ -1.68
YBX1P67809 Y_RNA.719-201ENST00000517156 106 ntBASIC4.58□□□□□ -1.68
YBX1P67809 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
YBX1P67809 RANP3-201ENST00000530970 276 ntBASIC4.58□□□□□ -1.68
YBX1P67809 OR8R1P-201ENST00000543943 764 ntBASIC4.58□□□□□ -1.68
YBX1P67809 AC105129.1-201ENST00000560250 297 ntBASIC4.58□□□□□ -1.68
YBX1P67809 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.58□□□□□ -1.68
YBX1P67809 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.58□□□□□ -1.68
YBX1P67809 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
YBX1P67809 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
YBX1P67809 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
YBX1P67809 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
YBX1P67809 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.58□□□□□ -1.68
YBX1P67809 SMG1P4-204ENST00000523028 4131 ntBASIC4.58□□□□□ -1.68
YBX1P67809 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
YBX1P67809 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.57□□□□□ -1.68
YBX1P67809 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.57□□□□□ -1.68
YBX1P67809 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
YBX1P67809 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
YBX1P67809 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
YBX1P67809 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
YBX1P67809 RNU1-32P-201ENST00000363937 159 ntBASIC4.57□□□□□ -1.68
YBX1P67809 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
YBX1P67809 Y_RNA.428-201ENST00000384078 102 ntBASIC4.57□□□□□ -1.68
YBX1P67809 RNU6-432P-201ENST00000384196 109 ntBASIC4.57□□□□□ -1.68
YBX1P67809 Y_RNA.489-201ENST00000384410 101 ntBASIC4.57□□□□□ -1.68
YBX1P67809 Y_RNA.645-201ENST00000391229 102 ntBASIC4.57□□□□□ -1.68
YBX1P67809 Y_RNA.594-201ENST00000410373 140 ntBASIC4.57□□□□□ -1.68
YBX1P67809 RN7SKP159-201ENST00000410657 292 ntBASIC4.57□□□□□ -1.68
YBX1P67809 RNU6-516P-201ENST00000411381 104 ntBASIC4.57□□□□□ -1.68
YBX1P67809 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.57□□□□□ -1.68
YBX1P67809 AC069213.2-201ENST00000420238 366 ntBASIC4.57□□□□□ -1.68
YBX1P67809 GNG5P5-201ENST00000420444 220 ntBASIC4.57□□□□□ -1.68
YBX1P67809 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.57□□□□□ -1.68
YBX1P67809 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.57□□□□□ -1.68
YBX1P67809 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.57□□□□□ -1.68
YBX1P67809 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.57□□□□□ -1.68
YBX1P67809 RPS5P7-201ENST00000456664 608 ntBASIC4.57□□□□□ -1.68
YBX1P67809 RPL12P20-201ENST00000475538 479 ntBASIC4.57□□□□□ -1.68
YBX1P67809 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.57□□□□□ -1.68
YBX1P67809 RBBP4P6-201ENST00000508098 202 ntBASIC4.57□□□□□ -1.68
YBX1P67809 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.57□□□□□ -1.68
YBX1P67809 SNORD116.3-201ENST00000517176 78 ntBASIC4.57□□□□□ -1.68
YBX1P67809 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.57□□□□□ -1.68
YBX1P67809 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.57□□□□□ -1.68
YBX1P67809 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.57□□□□□ -1.68
YBX1P67809 AL110118.1-201ENST00000553543 400 ntBASIC4.57□□□□□ -1.68
YBX1P67809 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.57□□□□□ -1.68
YBX1P67809 AC091042.1-201ENST00000579213 173 ntBASIC4.57□□□□□ -1.68
YBX1P67809 MIR3941-201ENST00000582572 103 ntBASIC4.57□□□□□ -1.68
YBX1P67809 AL365434.2-201ENST00000607979 234 ntBASIC4.57□□□□□ -1.68
YBX1P67809 AC062037.2-201ENST00000610137 73 ntBASIC4.57□□□□□ -1.68
YBX1P67809 U2.17-201ENST00000611454 95 ntBASIC4.57□□□□□ -1.68
YBX1P67809 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.57□□□□□ -1.68
YBX1P67809 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
YBX1P67809 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.57□□□□□ -1.68
YBX1P67809 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
YBX1P67809 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
YBX1P67809 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
YBX1P67809 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
YBX1P67809 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
YBX1P67809 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
YBX1P67809 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.56□□□□□ -1.68
YBX1P67809 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
YBX1P67809 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.56□□□□□ -1.68
YBX1P67809 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
YBX1P67809 GABPAP-201ENST00000419271 1356 ntBASIC4.56□□□□□ -1.68
YBX1P67809 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
YBX1P67809 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
YBX1P67809 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
YBX1P67809 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
YBX1P67809 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.56□□□□□ -1.68
YBX1P67809 RNVU1-3-201ENST00000364313 161 ntBASIC4.56□□□□□ -1.68
YBX1P67809 RNVU1-6-201ENST00000364688 164 ntBASIC4.56□□□□□ -1.68
YBX1P67809 RNU6-101P-201ENST00000410323 104 ntBASIC4.56□□□□□ -1.68
YBX1P67809 RN7SKP167-201ENST00000411047 285 ntBASIC4.56□□□□□ -1.68
YBX1P67809 RNU4-61P-201ENST00000411243 107 ntBASIC4.56□□□□□ -1.68
YBX1P67809 RPL7P10-201ENST00000417407 739 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms