Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
RPL39P62891 SNORA23-201ENST00000365128 182 ntBASIC0.75□□□□□ -2.29
RPL39P62891 SFR1P1-201ENST00000403720 688 ntBASIC0.75□□□□□ -2.29
RPL39P62891 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.75□□□□□ -2.29
RPL39P62891 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.75□□□□□ -2.29
RPL39P62891 OOSP1P1-201ENST00000423265 274 ntBASIC0.75□□□□□ -2.29
RPL39P62891 AL590233.1-201ENST00000430017 456 ntBASIC0.75□□□□□ -2.29
RPL39P62891 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.75□□□□□ -2.29
RPL39P62891 RNU7-26P-201ENST00000458980 63 ntBASIC0.75□□□□□ -2.29
RPL39P62891 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.75□□□□□ -2.29
RPL39P62891 AC117522.2-201ENST00000510049 657 ntBASIC0.75□□□□□ -2.29
RPL39P62891 AC105914.1-201ENST00000511798 226 ntBASIC0.75□□□□□ -2.29
RPL39P62891 AC091965.2-201ENST00000512324 613 ntBASIC0.75□□□□□ -2.29
RPL39P62891 AC025918.2-201ENST00000558683 763 ntBASIC0.75□□□□□ -2.29
RPL39P62891 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC0.75□□□□□ -2.29
RPL39P62891 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC0.75□□□□□ -2.29
RPL39P62891 AP000560.1-201ENST00000624150 1937 ntBASIC0.75□□□□□ -2.29
RPL39P62891 OR4G2P-202ENST00000641004 1759 ntBASIC0.75□□□□□ -2.29
RPL39P62891 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
RPL39P62891 AC004520.1-201ENST00000608362 1413 ntBASIC0.74□□□□□ -2.29
RPL39P62891 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
RPL39P62891 AC080128.1-201ENST00000474389 1917 ntBASIC0.74□□□□□ -2.29
RPL39P62891 AC007785.2-201ENST00000598627 1916 ntBASIC0.74□□□□□ -2.29
RPL39P62891 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
RPL39P62891 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
RPL39P62891 RNU6-19P-201ENST00000384718 107 ntBASIC0.74□□□□□ -2.29
RPL39P62891 SLC9B1P2-201ENST00000398120 1184 ntBASIC0.74□□□□□ -2.29
RPL39P62891 RNA5SP498-201ENST00000411342 120 ntBASIC0.74□□□□□ -2.29
RPL39P62891 RNA5SP270-201ENST00000411361 118 ntBASIC0.74□□□□□ -2.29
RPL39P62891 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.74□□□□□ -2.29
RPL39P62891 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC0.74□□□□□ -2.29
RPL39P62891 HMGB1P27-201ENST00000431429 603 ntBASIC0.74□□□□□ -2.29
RPL39P62891 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC0.74□□□□□ -2.29
RPL39P62891 AC093716.1-201ENST00000435923 377 ntBASIC0.74□□□□□ -2.29
RPL39P62891 RPL5P13-201ENST00000462840 709 ntBASIC0.74□□□□□ -2.29
RPL39P62891 NCOR1P1-202ENST00000486162 291 ntBASIC0.74□□□□□ -2.29
RPL39P62891 MLLT10P2-201ENST00000506434 249 ntBASIC0.74□□□□□ -2.29
RPL39P62891 AC093755.1-201ENST00000512950 1023 ntBASIC0.74□□□□□ -2.29
RPL39P62891 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC0.74□□□□□ -2.29
RPL39P62891 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
RPL39P62891 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.74□□□□□ -2.29
RPL39P62891 AC008739.2-201ENST00000597006 317 ntBASIC0.74□□□□□ -2.29
RPL39P62891 AC009570.1-201ENST00000609599 745 ntBASIC0.74□□□□□ -2.29
RPL39P62891 AC005332.10-201ENST00000612725 619 ntBASIC0.74□□□□□ -2.29
RPL39P62891 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
RPL39P62891 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
RPL39P62891 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
RPL39P62891 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
RPL39P62891 Y_RNA.111-201ENST00000363248 100 ntBASIC0.73□□□□□ -2.29
RPL39P62891 SNORA22-201ENST00000383907 134 ntBASIC0.73□□□□□ -2.29
RPL39P62891 SNORA22C-201ENST00000384614 134 ntBASIC0.73□□□□□ -2.29
RPL39P62891 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC0.73□□□□□ -2.29
RPL39P62891 ZDHHC20P2-201ENST00000424108 429 ntBASIC0.73□□□□□ -2.29
RPL39P62891 AL160175.1-201ENST00000428124 247 ntBASIC0.73□□□□□ -2.29
RPL39P62891 RPL23AP16-201ENST00000441715 421 ntBASIC0.73□□□□□ -2.29
RPL39P62891 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.73□□□□□ -2.29
RPL39P62891 RN7SKP210-201ENST00000459176 261 ntBASIC0.73□□□□□ -2.29
RPL39P62891 CABYRP1-201ENST00000465493 1045 ntBASIC0.73□□□□□ -2.29
RPL39P62891 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.73□□□□□ -2.29
RPL39P62891 AC107032.1-201ENST00000485945 480 ntBASIC0.73□□□□□ -2.29
RPL39P62891 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.73□□□□□ -2.29
RPL39P62891 RNU7-193P-201ENST00000516723 65 ntBASIC0.73□□□□□ -2.29
RPL39P62891 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
RPL39P62891 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC0.73□□□□□ -2.29
RPL39P62891 TRAV28-201ENST00000557548 323 ntBASIC0.73□□□□□ -2.29
RPL39P62891 AC068714.1-201ENST00000559623 800 ntBASIC0.73□□□□□ -2.29
RPL39P62891 AC027807.1-201ENST00000559921 996 ntBASIC0.73□□□□□ -2.29
RPL39P62891 U73023.1-201ENST00000603134 700 ntBASIC0.73□□□□□ -2.29
RPL39P62891 SNORD114-21-201ENST00000606412 72 ntBASIC0.73□□□□□ -2.29
RPL39P62891 AC103810.9-201ENST00000606688 112 ntBASIC0.73□□□□□ -2.29
RPL39P62891 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.73□□□□□ -2.29
RPL39P62891 AC092140.2-201ENST00000618027 521 ntBASIC0.73□□□□□ -2.29
RPL39P62891 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC0.73□□□□□ -2.29
RPL39P62891 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.73□□□□□ -2.29
RPL39P62891 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.72□□□□□ -2.29
RPL39P62891 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.72□□□□□ -2.29
RPL39P62891 RNU6-457P-201ENST00000363999 107 ntBASIC0.72□□□□□ -2.29
RPL39P62891 RNU6-76P-201ENST00000384060 104 ntBASIC0.72□□□□□ -2.29
RPL39P62891 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.72□□□□□ -2.29
RPL39P62891 RPS7P9-201ENST00000414704 586 ntBASIC0.72□□□□□ -2.29
RPL39P62891 AC007560.1-201ENST00000426912 237 ntBASIC0.72□□□□□ -2.29
RPL39P62891 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC0.72□□□□□ -2.29
RPL39P62891 AL590762.3-201ENST00000436372 640 ntBASIC0.72□□□□□ -2.29
RPL39P62891 RPL32P28-201ENST00000443577 397 ntBASIC0.72□□□□□ -2.29
RPL39P62891 GDI2P2-201ENST00000445131 608 ntBASIC0.72□□□□□ -2.29
RPL39P62891 COX6CP18-201ENST00000448769 222 ntBASIC0.72□□□□□ -2.29
RPL39P62891 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.72□□□□□ -2.29
RPL39P62891 RPL30P12-201ENST00000474666 353 ntBASIC0.72□□□□□ -2.29
RPL39P62891 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.72□□□□□ -2.29
RPL39P62891 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC0.72□□□□□ -2.29
RPL39P62891 COL6A4P2-205ENST00000509855 506 ntBASIC0.72□□□□□ -2.29
RPL39P62891 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC0.72□□□□□ -2.29
RPL39P62891 CBX3P7-201ENST00000532876 502 ntBASIC0.72□□□□□ -2.29
RPL39P62891 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.72□□□□□ -2.29
RPL39P62891 GLUD1P4-201ENST00000590914 418 ntBASIC0.72□□□□□ -2.29
RPL39P62891 uc_338.12-201ENST00000616344 181 ntBASIC0.72□□□□□ -2.29
RPL39P62891 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
RPL39P62891 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.72□□□□□ -2.29
RPL39P62891 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
RPL39P62891 SNORA7.1-201ENST00000363750 139 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms