Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC005345.1-201ENST00000431868 217 ntBASIC1.26□□□□□ -2.21
RPS28P62857 MTCO1P57-201ENST00000432182 261 ntBASIC1.26□□□□□ -2.21
RPS28P62857 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.26□□□□□ -2.21
RPS28P62857 AC092393.1-201ENST00000439625 742 ntBASIC1.26□□□□□ -2.21
RPS28P62857 RPS24P13-201ENST00000442520 397 ntBASIC1.26□□□□□ -2.21
RPS28P62857 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.26□□□□□ -2.21
RPS28P62857 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.26□□□□□ -2.21
RPS28P62857 MTCO3P11-201ENST00000455103 774 ntBASIC1.26□□□□□ -2.21
RPS28P62857 SETP20-201ENST00000457046 852 ntBASIC1.26□□□□□ -2.21
RPS28P62857 RPL32P14-201ENST00000463196 378 ntBASIC1.26□□□□□ -2.21
RPS28P62857 AC117440.1-201ENST00000474107 571 ntBASIC1.26□□□□□ -2.21
RPS28P62857 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RPS28P62857 MTATP6P1-201ENST00000514057 681 ntBASIC1.26□□□□□ -2.21
RPS28P62857 AC026801.2-201ENST00000515352 425 ntBASIC1.26□□□□□ -2.21
RPS28P62857 RNU6-760P-201ENST00000516078 97 ntBASIC1.26□□□□□ -2.21
RPS28P62857 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.26□□□□□ -2.21
RPS28P62857 RANP3-201ENST00000530970 276 ntBASIC1.26□□□□□ -2.21
RPS28P62857 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RPS28P62857 AC024224.1-201ENST00000538284 609 ntBASIC1.26□□□□□ -2.21
RPS28P62857 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.26□□□□□ -2.21
RPS28P62857 AC084033.1-201ENST00000550830 633 ntBASIC1.26□□□□□ -2.21
RPS28P62857 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC1.26□□□□□ -2.21
RPS28P62857 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.26□□□□□ -2.21
RPS28P62857 MIR3198-2-201ENST00000577868 80 ntBASIC1.26□□□□□ -2.21
RPS28P62857 MIR4270-201ENST00000581799 70 ntBASIC1.26□□□□□ -2.21
RPS28P62857 MIR4271-201ENST00000582451 67 ntBASIC1.26□□□□□ -2.21
RPS28P62857 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.26□□□□□ -2.21
RPS28P62857 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.26□□□□□ -2.21
RPS28P62857 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
RPS28P62857 AC068313.1-201ENST00000604028 1008 ntBASIC1.26□□□□□ -2.21
RPS28P62857 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC1.26□□□□□ -2.21
RPS28P62857 SNORA17.5-201ENST00000630429 132 ntBASIC1.26□□□□□ -2.21
RPS28P62857 MIR3199-2-201ENST00000636243 86 ntBASIC1.26□□□□□ -2.21
RPS28P62857 AC110491.1-201ENST00000562191 2010 ntBASIC1.26□□□□□ -2.21
RPS28P62857 AC096644.4-201ENST00000563417 2912 ntBASIC1.26□□□□□ -2.21
RPS28P62857 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.25□□□□□ -2.21
RPS28P62857 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RPS28P62857 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
RPS28P62857 ACEA_U3.1-201ENST00000363057 217 ntBASIC1.25□□□□□ -2.21
RPS28P62857 RNA5SP240-201ENST00000365355 128 ntBASIC1.25□□□□□ -2.21
RPS28P62857 SNORA40.19-201ENST00000390846 128 ntBASIC1.25□□□□□ -2.21
RPS28P62857 AL109755.1-201ENST00000401791 649 ntBASIC1.25□□□□□ -2.21
RPS28P62857 RPL7P27-201ENST00000403775 720 ntBASIC1.25□□□□□ -2.21
RPS28P62857 VN1R12P-201ENST00000403778 876 ntBASIC1.25□□□□□ -2.21
RPS28P62857 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
RPS28P62857 RNU2-33P-201ENST00000410344 192 ntBASIC1.25□□□□□ -2.21
RPS28P62857 AC008850.1-201ENST00000427546 362 ntBASIC1.25□□□□□ -2.21
RPS28P62857 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.25□□□□□ -2.21
RPS28P62857 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC1.25□□□□□ -2.21
RPS28P62857 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.25□□□□□ -2.21
RPS28P62857 AC092170.1-201ENST00000440211 356 ntBASIC1.25□□□□□ -2.21
RPS28P62857 AC093156.1-201ENST00000440382 670 ntBASIC1.25□□□□□ -2.21
RPS28P62857 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.25□□□□□ -2.21
RPS28P62857 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.25□□□□□ -2.21
RPS28P62857 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.25□□□□□ -2.21
RPS28P62857 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.25□□□□□ -2.21
RPS28P62857 RNA5SP57-201ENST00000459463 123 ntBASIC1.25□□□□□ -2.21
RPS28P62857 UQCRHP4-201ENST00000471686 272 ntBASIC1.25□□□□□ -2.21
RPS28P62857 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC1.25□□□□□ -2.21
RPS28P62857 HMGN1P11-201ENST00000508668 303 ntBASIC1.25□□□□□ -2.21
RPS28P62857 ARL6IP1P1-201ENST00000545836 610 ntBASIC1.25□□□□□ -2.21
RPS28P62857 AC233702.2-202ENST00000562547 291 ntBASIC1.25□□□□□ -2.21
RPS28P62857 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC1.25□□□□□ -2.21
RPS28P62857 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.25□□□□□ -2.21
RPS28P62857 AC020914.6-201ENST00000594327 272 ntBASIC1.25□□□□□ -2.21
RPS28P62857 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.25□□□□□ -2.21
RPS28P62857 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.25□□□□□ -2.21
RPS28P62857 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.25□□□□□ -2.21
RPS28P62857 AC009974.1-201ENST00000608881 455 ntBASIC1.25□□□□□ -2.21
RPS28P62857 AC107294.1-201ENST00000609524 467 ntBASIC1.25□□□□□ -2.21
RPS28P62857 AC138932.5-201ENST00000617759 563 ntBASIC1.25□□□□□ -2.21
RPS28P62857 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.25□□□□□ -2.21
RPS28P62857 MIR6829-201ENST00000620375 67 ntBASIC1.25□□□□□ -2.21
RPS28P62857 MIR6813-201ENST00000621638 56 ntBASIC1.25□□□□□ -2.21
RPS28P62857 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RPS28P62857 AL161722.3-201ENST00000605789 2983 ntBASIC1.25□□□□□ -2.21
RPS28P62857 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
RPS28P62857 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
RPS28P62857 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RPS28P62857 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RPS28P62857 RNU6-252P-201ENST00000363232 107 ntBASIC1.24□□□□□ -2.21
RPS28P62857 RNA5SP212-201ENST00000391223 107 ntBASIC1.24□□□□□ -2.21
RPS28P62857 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.24□□□□□ -2.21
RPS28P62857 AL512649.1-201ENST00000428997 581 ntBASIC1.24□□□□□ -2.21
RPS28P62857 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC1.24□□□□□ -2.21
RPS28P62857 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.24□□□□□ -2.21
RPS28P62857 AL357134.1-201ENST00000445848 426 ntBASIC1.24□□□□□ -2.21
RPS28P62857 AL360221.1-201ENST00000445989 335 ntBASIC1.24□□□□□ -2.21
RPS28P62857 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.24□□□□□ -2.21
RPS28P62857 AL096803.2-201ENST00000450032 677 ntBASIC1.24□□□□□ -2.21
RPS28P62857 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.24□□□□□ -2.21
RPS28P62857 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.24□□□□□ -2.21
RPS28P62857 FPGT-203ENST00000467578 601 ntTSL 2 BASIC1.24□□□□□ -2.21
RPS28P62857 RN7SL354P-201ENST00000469282 294 ntBASIC1.24□□□□□ -2.21
RPS28P62857 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RPS28P62857 RPS20P22-201ENST00000473700 357 ntBASIC1.24□□□□□ -2.21
RPS28P62857 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC1.24□□□□□ -2.21
RPS28P62857 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RPS28P62857 FAM206BP-201ENST00000510179 541 ntBASIC1.24□□□□□ -2.21
RPS28P62857 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms