Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.97□□□□□ -1.93
LMO4P61968 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
LMO4P61968 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 AP001350.1-201ENST00000601906 1524 ntBASIC2.97□□□□□ -1.93
LMO4P61968 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
LMO4P61968 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 FARSBP1-201ENST00000435808 1778 ntBASIC2.97□□□□□ -1.93
LMO4P61968 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
LMO4P61968 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC2.97□□□□□ -1.93
LMO4P61968 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
LMO4P61968 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
LMO4P61968 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.96□□□□□ -1.94
LMO4P61968 MAPK10-253ENST00000641010 4072 ntBASIC2.96□□□□□ -1.94
LMO4P61968 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
LMO4P61968 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LMO4P61968 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LMO4P61968 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.96□□□□□ -1.94
LMO4P61968 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
LMO4P61968 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
LMO4P61968 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
LMO4P61968 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
LMO4P61968 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
LMO4P61968 RNA5SP258-201ENST00000362750 119 ntBASIC2.96□□□□□ -1.94
LMO4P61968 RNA5SP267-201ENST00000364893 126 ntBASIC2.96□□□□□ -1.94
LMO4P61968 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
LMO4P61968 HMGB1P17-201ENST00000403495 628 ntBASIC2.96□□□□□ -1.94
LMO4P61968 MIR1305-201ENST00000408300 86 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LMO4P61968 OR51A5P-201ENST00000415429 942 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.96□□□□□ -1.94
LMO4P61968 MTCO3P12-201ENST00000416718 547 ntBASIC2.96□□□□□ -1.94
LMO4P61968 TIMM9P3-201ENST00000428659 274 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC2.96□□□□□ -1.94
LMO4P61968 SKP1P1-201ENST00000438081 489 ntBASIC2.96□□□□□ -1.94
LMO4P61968 RPS3AP12-201ENST00000443616 753 ntBASIC2.96□□□□□ -1.94
LMO4P61968 ELOCP23-201ENST00000452014 332 ntBASIC2.96□□□□□ -1.94
LMO4P61968 MTCO3P20-201ENST00000454926 688 ntBASIC2.96□□□□□ -1.94
LMO4P61968 BX322784.1-201ENST00000455793 1077 ntBASIC2.96□□□□□ -1.94
LMO4P61968 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.96□□□□□ -1.94
LMO4P61968 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LMO4P61968 AC087312.1-201ENST00000471411 480 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AC069499.1-201ENST00000489433 509 ntBASIC2.96□□□□□ -1.94
LMO4P61968 RPL23AP55-201ENST00000498163 452 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AC112204.1-201ENST00000502591 103 ntBASIC2.96□□□□□ -1.94
LMO4P61968 HSPD1P15-201ENST00000505573 1122 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AC022447.3-201ENST00000506865 495 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AC105914.1-201ENST00000511798 226 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.96□□□□□ -1.94
LMO4P61968 AC046134.1-201ENST00000514454 666 ntBASIC2.96□□□□□ -1.94
LMO4P61968 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.96□□□□□ -1.94
LMO4P61968 RNU6-358P-201ENST00000516564 75 ntBASIC2.96□□□□□ -1.94
LMO4P61968 Y_RNA.704-201ENST00000516851 102 ntBASIC2.96□□□□□ -1.94
LMO4P61968 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.96□□□□□ -1.94
LMO4P61968 AC109635.3-201ENST00000529536 185 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.96□□□□□ -1.94
LMO4P61968 RAB11AP2-201ENST00000545905 639 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AC107016.1-201ENST00000550463 337 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AC012182.1-201ENST00000570133 895 ntBASIC2.96□□□□□ -1.94
LMO4P61968 MIR5186-201ENST00000577504 120 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.96□□□□□ -1.94
LMO4P61968 MIR4637-201ENST00000582405 84 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.96□□□□□ -1.94
LMO4P61968 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.96□□□□□ -1.94
LMO4P61968 HMGN1P30-201ENST00000589286 268 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AL365503.1-201ENST00000605247 905 ntBASIC2.96□□□□□ -1.94
LMO4P61968 AL390208.1-201ENST00000605885 644 ntBASIC2.96□□□□□ -1.94
LMO4P61968 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.96□□□□□ -1.94
LMO4P61968 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.96□□□□□ -1.94
LMO4P61968 AC040168.1-201ENST00000623594 991 ntBASIC2.96□□□□□ -1.94
LMO4P61968 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.96□□□□□ -1.94
LMO4P61968 PISRT1-201ENST00000626175 531 ntBASIC2.96□□□□□ -1.94
LMO4P61968 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.96□□□□□ -1.94
LMO4P61968 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
LMO4P61968 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
LMO4P61968 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.96□□□□□ -1.94
LMO4P61968 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LMO4P61968 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
LMO4P61968 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LMO4P61968 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
LMO4P61968 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
LMO4P61968 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LMO4P61968 USP8P1-201ENST00000494673 3183 ntBASIC2.96□□□□□ -1.94
LMO4P61968 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC2.95□□□□□ -1.94
LMO4P61968 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LMO4P61968 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
LMO4P61968 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.95□□□□□ -1.94
LMO4P61968 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.95□□□□□ -1.94
LMO4P61968 AP002907.1-201ENST00000606361 1430 ntBASIC2.95□□□□□ -1.94
LMO4P61968 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.95□□□□□ -1.94
LMO4P61968 CBX3P1-201ENST00000325243 554 ntBASIC2.95□□□□□ -1.94
LMO4P61968 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LMO4P61968 Y_RNA.89-201ENST00000363031 102 ntBASIC2.95□□□□□ -1.94
LMO4P61968 RNU6-181P-201ENST00000363225 107 ntBASIC2.95□□□□□ -1.94
LMO4P61968 RNU1-33P-201ENST00000364249 162 ntBASIC2.95□□□□□ -1.94
LMO4P61968 Y_RNA.295-201ENST00000364918 102 ntBASIC2.95□□□□□ -1.94
LMO4P61968 RNA5SP235-201ENST00000365411 114 ntBASIC2.95□□□□□ -1.94
LMO4P61968 Y_RNA.409-201ENST00000383990 98 ntBASIC2.95□□□□□ -1.94
LMO4P61968 ARF4P3-201ENST00000397387 509 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms