Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RHBDL3P58872 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.21□□□□□ -1.73
RHBDL3P58872 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
RHBDL3P58872 AC007785.2-201ENST00000598627 1916 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.21□□□□□ -1.74
RHBDL3P58872 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RHBDL3P58872 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.21□□□□□ -1.74
RHBDL3P58872 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RHBDL3P58872 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.21□□□□□ -1.74
RHBDL3P58872 AL451054.2-201ENST00000420896 202 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.21□□□□□ -1.74
RHBDL3P58872 AC093156.1-201ENST00000440382 670 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.21□□□□□ -1.74
RHBDL3P58872 AC093663.1-201ENST00000497190 394 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 KCTD9P5-201ENST00000504141 1170 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.21□□□□□ -1.74
RHBDL3P58872 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.21□□□□□ -1.74
RHBDL3P58872 RNU2-27P-201ENST00000516185 142 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 SNORA74D-201ENST00000516404 141 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 SNORA70.24-201ENST00000517233 118 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RHBDL3P58872 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.21□□□□□ -1.74
RHBDL3P58872 AC011602.1-201ENST00000546484 331 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 AC007115.1-201ENST00000546853 234 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.21□□□□□ -1.74
RHBDL3P58872 ZNF519P3-201ENST00000557158 1032 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.21□□□□□ -1.74
RHBDL3P58872 MIR5697-201ENST00000578045 78 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 AC020914.4-201ENST00000597690 277 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 Z99497.2-201ENST00000603634 310 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 AC108479.2-201ENST00000617314 601 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 AC009878.1-201ENST00000621819 340 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 MIR4727-201ENST00000622232 55 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 MIR3651-201ENST00000630427 90 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 CR381670.1-201ENST00000624291 1693 ntBASIC4.21□□□□□ -1.74
RHBDL3P58872 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.21□□□□□ -1.74
RHBDL3P58872 AC103988.1-201ENST00000566382 2177 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.2□□□□□ -1.74
RHBDL3P58872 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RHBDL3P58872 AL356274.2-201ENST00000624379 3752 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RHBDL3P58872 FRG1CP-201ENST00000358464 769 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 RNA5SP42-201ENST00000364278 115 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.2□□□□□ -1.74
RHBDL3P58872 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
RHBDL3P58872 RNU1-39P-201ENST00000383897 165 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 MIR483-201ENST00000385070 76 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 MT-TH-201ENST00000387441 69 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 FCF1P10-201ENST00000407590 479 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.2□□□□□ -1.74
RHBDL3P58872 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.2□□□□□ -1.74
RHBDL3P58872 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.2□□□□□ -1.74
RHBDL3P58872 AC005019.1-201ENST00000436455 431 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.2□□□□□ -1.74
RHBDL3P58872 EPS15P1-201ENST00000448836 336 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 RN7SL601P-201ENST00000471221 293 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 MTND3P7-201ENST00000474435 343 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 BTF3L4P4-201ENST00000506381 449 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 AC006445.2-201ENST00000510061 472 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 AC010486.3-201ENST00000511602 785 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 AC119751.5-201ENST00000514077 770 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.2□□□□□ -1.74
RHBDL3P58872 RNU6-64P-201ENST00000517119 105 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 IGKV2-26-201ENST00000518305 343 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 CASP1P1-201ENST00000526345 212 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.2□□□□□ -1.74
RHBDL3P58872 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.2□□□□□ -1.74
RHBDL3P58872 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
RHBDL3P58872 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.2□□□□□ -1.74
RHBDL3P58872 AC005951.2-201ENST00000576282 495 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.2□□□□□ -1.74
RHBDL3P58872 AC112191.3-201ENST00000604371 277 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 AL031775.1-201ENST00000607014 887 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 RNU6-87P-201ENST00000607561 108 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.2□□□□□ -1.74
RHBDL3P58872 AC138749.5-201ENST00000611461 208 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 uc_338.12-201ENST00000616344 181 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 AC116165.2-201ENST00000616705 206 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.2□□□□□ -1.74
RHBDL3P58872 AP003355.3-201ENST00000623465 114 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 AC110801.1-201ENST00000623590 212 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 MIR3974-201ENST00000637126 96 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 OR5H6-203ENST00000642105 978 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 AL732372.2-225ENST00000642124 456 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.2□□□□□ -1.74
RHBDL3P58872 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.2□□□□□ -1.74
RHBDL3P58872 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RHBDL3P58872 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.19□□□□□ -1.74
RHBDL3P58872 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RHBDL3P58872 MRPL42P2-201ENST00000403169 426 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 HSPE1P8-201ENST00000406997 288 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 U3.39-201ENST00000408569 239 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 RNA5SP120-201ENST00000410900 112 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 AC091390.3-201ENST00000426478 338 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 HIGD1AP11-201ENST00000438361 280 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 COX6CP12-201ENST00000446748 202 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.19□□□□□ -1.74
RHBDL3P58872 AC092798.1-201ENST00000458542 409 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 AC020893.1-201ENST00000502452 580 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms