Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC097462.2-201ENST00000504623 481 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC093809.1-201ENST00000509155 340 ntBASIC3.12□□□□□ -1.91
PEX3P56589 MTND1P22-201ENST00000510572 951 ntBASIC3.12□□□□□ -1.91
PEX3P56589 MTCYBP43-201ENST00000513621 740 ntBASIC3.12□□□□□ -1.91
PEX3P56589 RNU6-1095P-201ENST00000516148 108 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC239860.2-201ENST00000525886 270 ntBASIC3.12□□□□□ -1.91
PEX3P56589 OR4P1P-201ENST00000530808 1136 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC018630.1-201ENST00000541376 925 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.12□□□□□ -1.91
PEX3P56589 AC008015.1-201ENST00000555505 465 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.12□□□□□ -1.91
PEX3P56589 AC135628.1-201ENST00000568867 534 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC083760.1-201ENST00000589621 670 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC004987.4-201ENST00000603383 338 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC068313.1-201ENST00000604028 1008 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC004853.1-201ENST00000604902 698 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC055876.5-201ENST00000605667 259 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC090186.1-201ENST00000605991 572 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AL031667.3-201ENST00000620124 655 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC079248.2-201ENST00000623779 326 ntBASIC3.12□□□□□ -1.91
PEX3P56589 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.12□□□□□ -1.91
PEX3P56589 AL365361.1-201ENST00000566942 3481 ntBASIC3.12□□□□□ -1.91
PEX3P56589 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PEX3P56589 AC092593.1-201ENST00000515413 1815 ntBASIC3.12□□□□□ -1.91
PEX3P56589 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
PEX3P56589 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PEX3P56589 RNU6-1155P-201ENST00000363554 107 ntBASIC3.11□□□□□ -1.91
PEX3P56589 SNORA80A-201ENST00000363922 136 ntBASIC3.11□□□□□ -1.91
PEX3P56589 Y_RNA.302-201ENST00000364997 102 ntBASIC3.11□□□□□ -1.91
PEX3P56589 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.11□□□□□ -1.91
PEX3P56589 SAR1AP2-201ENST00000392696 594 ntBASIC3.11□□□□□ -1.91
PEX3P56589 AF228730.1-201ENST00000397972 663 ntBASIC3.11□□□□□ -1.91
PEX3P56589 AL031121.1-201ENST00000406553 254 ntBASIC3.11□□□□□ -1.91
PEX3P56589 AL592148.1-201ENST00000413568 445 ntBASIC3.11□□□□□ -1.91
PEX3P56589 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.11□□□□□ -1.91
PEX3P56589 AL645937.1-202ENST00000421799 937 ntBASIC3.11□□□□□ -1.91
PEX3P56589 MTND1P20-201ENST00000430341 950 ntBASIC3.11□□□□□ -1.91
PEX3P56589 MTND5P25-201ENST00000430499 799 ntBASIC3.11□□□□□ -1.91
PEX3P56589 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.11□□□□□ -1.91
PEX3P56589 AL831737.1-201ENST00000441288 271 ntBASIC3.11□□□□□ -1.91
PEX3P56589 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.11□□□□□ -1.91
PEX3P56589 AC096576.1-201ENST00000489014 359 ntBASIC3.11□□□□□ -1.91
PEX3P56589 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.11□□□□□ -1.91
PEX3P56589 AC091826.1-201ENST00000514065 313 ntBASIC3.11□□□□□ -1.91
PEX3P56589 GMPSP1-201ENST00000514075 579 ntBASIC3.11□□□□□ -1.91
PEX3P56589 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.11□□□□□ -1.91
PEX3P56589 RNA5SP367-201ENST00000516557 118 ntBASIC3.11□□□□□ -1.91
PEX3P56589 SNORA31.20-201ENST00000517111 133 ntBASIC3.11□□□□□ -1.91
PEX3P56589 MRPS36P5-201ENST00000551909 298 ntBASIC3.11□□□□□ -1.91
PEX3P56589 MIR4474-201ENST00000579189 78 ntBASIC3.11□□□□□ -1.91
PEX3P56589 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.11□□□□□ -1.91
PEX3P56589 CLIC4P2-201ENST00000601934 717 ntBASIC3.11□□□□□ -1.91
PEX3P56589 RNU6-88P-201ENST00000606801 100 ntBASIC3.11□□□□□ -1.91
PEX3P56589 AC090115.4-201ENST00000609970 188 ntBASIC3.11□□□□□ -1.91
PEX3P56589 AL356585.4-201ENST00000623078 1229 ntBASIC3.11□□□□□ -1.91
PEX3P56589 AP000676.3-201ENST00000623299 569 ntBASIC3.11□□□□□ -1.91
PEX3P56589 AC097655.1-201ENST00000635075 318 ntBASIC3.11□□□□□ -1.91
PEX3P56589 AC007671.2-201ENST00000637344 619 ntBASIC3.11□□□□□ -1.91
PEX3P56589 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
PEX3P56589 MTND5P19-201ENST00000424872 1794 ntBASIC3.1□□□□□ -1.91
PEX3P56589 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PEX3P56589 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PEX3P56589 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PEX3P56589 RNA5SP88-201ENST00000365560 109 ntBASIC3.1□□□□□ -1.91
PEX3P56589 RNU6-723P-201ENST00000383973 107 ntBASIC3.1□□□□□ -1.91
PEX3P56589 MIR607-201ENST00000385241 96 ntBASIC3.1□□□□□ -1.91
PEX3P56589 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PEX3P56589 AL356131.1-201ENST00000405826 414 ntBASIC3.1□□□□□ -1.91
PEX3P56589 RNU4-72P-201ENST00000410754 173 ntBASIC3.1□□□□□ -1.91
PEX3P56589 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.1□□□□□ -1.91
PEX3P56589 RPL23AP39-201ENST00000415533 405 ntBASIC3.1□□□□□ -1.91
PEX3P56589 AL451074.5-201ENST00000415894 435 ntBASIC3.1□□□□□ -1.91
PEX3P56589 RAD23BP2-201ENST00000416003 1207 ntBASIC3.1□□□□□ -1.91
PEX3P56589 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.1□□□□□ -1.91
PEX3P56589 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.1□□□□□ -1.91
PEX3P56589 AL445669.1-201ENST00000426743 755 ntBASIC3.1□□□□□ -1.91
PEX3P56589 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.1□□□□□ -1.91
PEX3P56589 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
PEX3P56589 MTND4LP10-201ENST00000435146 291 ntBASIC3.1□□□□□ -1.91
PEX3P56589 SNRPEP7-201ENST00000438350 220 ntBASIC3.1□□□□□ -1.91
PEX3P56589 AL445567.1-201ENST00000439121 144 ntBASIC3.1□□□□□ -1.91
PEX3P56589 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
PEX3P56589 AL133217.1-201ENST00000450980 425 ntBASIC3.1□□□□□ -1.91
PEX3P56589 RPL23AP35-201ENST00000451906 501 ntBASIC3.1□□□□□ -1.91
PEX3P56589 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.1□□□□□ -1.91
PEX3P56589 LINC00888-204ENST00000487386 421 ntBASIC3.1□□□□□ -1.91
PEX3P56589 AC096751.1-202ENST00000502691 1067 ntBASIC3.1□□□□□ -1.91
PEX3P56589 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PEX3P56589 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.1□□□□□ -1.91
PEX3P56589 AC024589.1-201ENST00000512207 263 ntBASIC3.1□□□□□ -1.91
PEX3P56589 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PEX3P56589 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.1□□□□□ -1.91
PEX3P56589 HPRT1P3-201ENST00000539521 576 ntBASIC3.1□□□□□ -1.91
PEX3P56589 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.1□□□□□ -1.91
PEX3P56589 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.1□□□□□ -1.91
PEX3P56589 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.1□□□□□ -1.91
PEX3P56589 AC126177.3-201ENST00000551839 688 ntBASIC3.1□□□□□ -1.91
PEX3P56589 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.1□□□□□ -1.91
PEX3P56589 MTND3P12-201ENST00000559068 328 ntBASIC3.1□□□□□ -1.91
PEX3P56589 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms