Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AL359999.1-201ENST00000604513 294 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AL031176.1-201ENST00000604554 466 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AL161729.4-201ENST00000604650 476 ntBASIC3.79□□□□□ -1.8
PMS2P54278 SNORA51-201ENST00000606420 132 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AC098614.4-201ENST00000607601 462 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AL590282.1-201ENST00000610379 1136 ntBASIC3.79□□□□□ -1.8
PMS2P54278 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AC008250.2-201ENST00000615261 205 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AC072046.2-201ENST00000618366 268 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AC073534.2-201ENST00000620377 381 ntBASIC3.79□□□□□ -1.8
PMS2P54278 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PMS2P54278 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.79□□□□□ -1.8
PMS2P54278 OR5AK4P-201ENST00000635912 903 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AL732372.2-225ENST00000642124 456 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AC116096.1-201ENST00000566804 2314 ntBASIC3.79□□□□□ -1.8
PMS2P54278 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PMS2P54278 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PMS2P54278 FARSBP1-201ENST00000435808 1778 ntBASIC3.79□□□□□ -1.8
PMS2P54278 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PMS2P54278 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PMS2P54278 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PMS2P54278 AC092447.10-201ENST00000620607 1652 ntBASIC3.78□□□□□ -1.8
PMS2P54278 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.78□□□□□ -1.8
PMS2P54278 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PMS2P54278 RNA5SP124-201ENST00000362739 110 ntBASIC3.78□□□□□ -1.8
PMS2P54278 RNA5SP42-201ENST00000364278 115 ntBASIC3.78□□□□□ -1.8
PMS2P54278 RNU6-744P-201ENST00000365557 107 ntBASIC3.78□□□□□ -1.8
PMS2P54278 RNU6-1316P-201ENST00000384242 108 ntBASIC3.78□□□□□ -1.8
PMS2P54278 MIR7-3-201ENST00000384898 110 ntBASIC3.78□□□□□ -1.8
PMS2P54278 YME1L1P1-201ENST00000429435 297 ntBASIC3.78□□□□□ -1.8
PMS2P54278 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.78□□□□□ -1.8
PMS2P54278 MTCYBP45-201ENST00000435243 565 ntBASIC3.78□□□□□ -1.8
PMS2P54278 FAM103A2P-201ENST00000444122 354 ntBASIC3.78□□□□□ -1.8
PMS2P54278 HMGB1P36-201ENST00000487709 576 ntBASIC3.78□□□□□ -1.8
PMS2P54278 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.78□□□□□ -1.8
PMS2P54278 RPL9P6-201ENST00000492764 598 ntBASIC3.78□□□□□ -1.8
PMS2P54278 AC034222.1-201ENST00000494052 532 ntBASIC3.78□□□□□ -1.8
PMS2P54278 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.78□□□□□ -1.8
PMS2P54278 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.78□□□□□ -1.8
PMS2P54278 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.78□□□□□ -1.8
PMS2P54278 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.78□□□□□ -1.8
PMS2P54278 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.78□□□□□ -1.8
PMS2P54278 RNA5SP164-201ENST00000516533 110 ntBASIC3.78□□□□□ -1.8
PMS2P54278 RNU6-430P-201ENST00000517078 107 ntBASIC3.78□□□□□ -1.8
PMS2P54278 DEFB108A-201ENST00000530110 222 ntBASIC3.78□□□□□ -1.8
PMS2P54278 AP003122.4-201ENST00000530980 758 ntBASIC3.78□□□□□ -1.8
PMS2P54278 CR383656.7-201ENST00000548164 174 ntBASIC3.78□□□□□ -1.8
PMS2P54278 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.78□□□□□ -1.8
PMS2P54278 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.78□□□□□ -1.8
PMS2P54278 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.78□□□□□ -1.8
PMS2P54278 AL845331.3-202ENST00000562856 261 ntBASIC3.78□□□□□ -1.8
PMS2P54278 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.78□□□□□ -1.8
PMS2P54278 MIR3682-201ENST00000581338 84 ntBASIC3.78□□□□□ -1.8
PMS2P54278 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.78□□□□□ -1.8
PMS2P54278 AC091965.4-201ENST00000607691 587 ntBASIC3.78□□□□□ -1.8
PMS2P54278 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.78□□□□□ -1.8
PMS2P54278 AL121772.2-201ENST00000614331 297 ntBASIC3.78□□□□□ -1.8
PMS2P54278 AC090517.2-201ENST00000614966 680 ntBASIC3.78□□□□□ -1.8
PMS2P54278 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.78□□□□□ -1.8
PMS2P54278 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PMS2P54278 AC005183.1-201ENST00000603687 1979 ntBASIC3.78□□□□□ -1.8
PMS2P54278 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.78□□□□□ -1.8
PMS2P54278 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
PMS2P54278 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PMS2P54278 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PMS2P54278 PWAR6-201ENST00000552334 4618 ntBASIC3.77□□□□□ -1.81
PMS2P54278 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PMS2P54278 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.77□□□□□ -1.81
PMS2P54278 AC092326.2-201ENST00000624772 1561 ntBASIC3.77□□□□□ -1.81
PMS2P54278 RNU6-1283P-201ENST00000365314 105 ntBASIC3.77□□□□□ -1.81
PMS2P54278 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
PMS2P54278 SNORD3H-201ENST00000384486 214 ntBASIC3.77□□□□□ -1.81
PMS2P54278 RPS20P2-201ENST00000402520 389 ntBASIC3.77□□□□□ -1.81
PMS2P54278 RPL7P25-201ENST00000404151 721 ntBASIC3.77□□□□□ -1.81
PMS2P54278 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.77□□□□□ -1.81
PMS2P54278 C1DP2-201ENST00000418167 426 ntBASIC3.77□□□□□ -1.81
PMS2P54278 USP9YP18-201ENST00000425912 695 ntBASIC3.77□□□□□ -1.81
PMS2P54278 UBE2V1P8-201ENST00000437166 265 ntBASIC3.77□□□□□ -1.81
PMS2P54278 AC073614.1-201ENST00000438690 650 ntBASIC3.77□□□□□ -1.81
PMS2P54278 RBMX2P4-201ENST00000441256 376 ntBASIC3.77□□□□□ -1.81
PMS2P54278 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.77□□□□□ -1.81
PMS2P54278 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.77□□□□□ -1.81
PMS2P54278 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.77□□□□□ -1.81
PMS2P54278 AC093278.1-201ENST00000494700 600 ntBASIC3.77□□□□□ -1.81
PMS2P54278 KCTD9P5-201ENST00000504141 1170 ntBASIC3.77□□□□□ -1.81
PMS2P54278 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.77□□□□□ -1.81
PMS2P54278 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PMS2P54278 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.77□□□□□ -1.81
PMS2P54278 SNORA18.6-201ENST00000516792 115 ntBASIC3.77□□□□□ -1.81
PMS2P54278 RNU6-1073P-201ENST00000517182 106 ntBASIC3.77□□□□□ -1.81
PMS2P54278 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
PMS2P54278 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.77□□□□□ -1.81
PMS2P54278 AC008011.1-201ENST00000545989 227 ntBASIC3.77□□□□□ -1.81
PMS2P54278 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.77□□□□□ -1.81
PMS2P54278 AC137800.2-201ENST00000574375 120 ntBASIC3.77□□□□□ -1.81
PMS2P54278 AL606834.2-201ENST00000602954 668 ntBASIC3.77□□□□□ -1.81
PMS2P54278 AC091304.9-201ENST00000612091 226 ntBASIC3.77□□□□□ -1.81
PMS2P54278 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.77□□□□□ -1.81
PMS2P54278 PISRT1-201ENST00000626175 531 ntBASIC3.77□□□□□ -1.81
PMS2P54278 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 241 ms