Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PMS1P54277 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.87□□□□□ -1.63
PMS1P54277 AC005741.1-201ENST00000511094 432 ntBASIC4.87□□□□□ -1.63
PMS1P54277 RNU6-1095P-201ENST00000516148 108 ntBASIC4.87□□□□□ -1.63
PMS1P54277 RNU6-566P-201ENST00000516790 107 ntBASIC4.87□□□□□ -1.63
PMS1P54277 IGKV1-32-201ENST00000519290 311 ntBASIC4.87□□□□□ -1.63
PMS1P54277 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.87□□□□□ -1.63
PMS1P54277 AC093012.1-202ENST00000549403 582 ntBASIC4.87□□□□□ -1.63
PMS1P54277 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.87□□□□□ -1.63
PMS1P54277 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.87□□□□□ -1.63
PMS1P54277 OR11H5P-201ENST00000554039 926 ntBASIC4.87□□□□□ -1.63
PMS1P54277 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.87□□□□□ -1.63
PMS1P54277 MIR4270-201ENST00000581799 70 ntBASIC4.87□□□□□ -1.63
PMS1P54277 AC008521.1-201ENST00000587471 187 ntBASIC4.87□□□□□ -1.63
PMS1P54277 AC012669.1-201ENST00000603209 283 ntBASIC4.87□□□□□ -1.63
PMS1P54277 AP000942.4-201ENST00000604811 241 ntBASIC4.87□□□□□ -1.63
PMS1P54277 AL670379.4-201ENST00000605279 254 ntBASIC4.87□□□□□ -1.63
PMS1P54277 AL138721.1-201ENST00000616756 179 ntBASIC4.87□□□□□ -1.63
PMS1P54277 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PMS1P54277 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PMS1P54277 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PMS1P54277 FAM91A3P-201ENST00000456826 2544 ntBASIC4.87□□□□□ -1.63
PMS1P54277 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.87□□□□□ -1.63
PMS1P54277 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
PMS1P54277 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PMS1P54277 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.86□□□□□ -1.63
PMS1P54277 AC022893.2-201ENST00000564832 3296 ntBASIC4.86□□□□□ -1.63
PMS1P54277 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PMS1P54277 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PMS1P54277 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PMS1P54277 Y_RNA.202-201ENST00000364083 110 ntBASIC4.86□□□□□ -1.63
PMS1P54277 MIR1911-201ENST00000410783 80 ntBASIC4.86□□□□□ -1.63
PMS1P54277 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PMS1P54277 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.86□□□□□ -1.63
PMS1P54277 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.86□□□□□ -1.63
PMS1P54277 RPL21P112-201ENST00000434403 463 ntBASIC4.86□□□□□ -1.63
PMS1P54277 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PMS1P54277 AC011753.3-201ENST00000443436 406 ntBASIC4.86□□□□□ -1.63
PMS1P54277 GAPDHP27-201ENST00000447427 1020 ntBASIC4.86□□□□□ -1.63
PMS1P54277 TRBV1-201ENST00000476502 284 ntBASIC4.86□□□□□ -1.63
PMS1P54277 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.86□□□□□ -1.63
PMS1P54277 HMGB3P15-201ENST00000507326 574 ntBASIC4.86□□□□□ -1.63
PMS1P54277 RNU6-189P-201ENST00000516120 101 ntBASIC4.86□□□□□ -1.63
PMS1P54277 RNU6-256P-201ENST00000516747 97 ntBASIC4.86□□□□□ -1.63
PMS1P54277 RNU6-685P-201ENST00000517088 95 ntBASIC4.86□□□□□ -1.63
PMS1P54277 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.86□□□□□ -1.63
PMS1P54277 AC012182.1-201ENST00000570133 895 ntBASIC4.86□□□□□ -1.63
PMS1P54277 AC104662.1-201ENST00000604448 511 ntBASIC4.86□□□□□ -1.63
PMS1P54277 AC040896.1-201ENST00000613819 479 ntBASIC4.86□□□□□ -1.63
PMS1P54277 OR52H1-202ENST00000641796 1061 ntBASIC4.86□□□□□ -1.63
PMS1P54277 AL139811.1-201ENST00000424779 2299 ntBASIC4.86□□□□□ -1.63
PMS1P54277 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PMS1P54277 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PMS1P54277 AL137003.2-201ENST00000606924 2538 ntBASIC4.86□□□□□ -1.63
PMS1P54277 MFSD8-216ENST00000641147 4009 ntBASIC4.86□□□□□ -1.63
PMS1P54277 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PMS1P54277 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PMS1P54277 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.85□□□□□ -1.63
PMS1P54277 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
PMS1P54277 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PMS1P54277 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PMS1P54277 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PMS1P54277 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
PMS1P54277 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PMS1P54277 RNU6-1249P-201ENST00000363237 111 ntBASIC4.85□□□□□ -1.63
PMS1P54277 RNU6-1155P-201ENST00000363554 107 ntBASIC4.85□□□□□ -1.63
PMS1P54277 Y_RNA.422-201ENST00000384054 114 ntBASIC4.85□□□□□ -1.63
PMS1P54277 MIR153-1-201ENST00000384914 90 ntBASIC4.85□□□□□ -1.63
PMS1P54277 RNA5SP219-201ENST00000390940 113 ntBASIC4.85□□□□□ -1.63
PMS1P54277 AC097374.1-203ENST00000400783 485 ntBASIC4.85□□□□□ -1.63
PMS1P54277 NDUFS5P1-201ENST00000405668 289 ntBASIC4.85□□□□□ -1.63
PMS1P54277 RPL5P18-201ENST00000406671 891 ntBASIC4.85□□□□□ -1.63
PMS1P54277 RN7SKP158-201ENST00000410453 326 ntBASIC4.85□□□□□ -1.63
PMS1P54277 RNU6-370P-201ENST00000411008 104 ntBASIC4.85□□□□□ -1.63
PMS1P54277 RPL26P29-201ENST00000415623 438 ntBASIC4.85□□□□□ -1.63
PMS1P54277 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.85□□□□□ -1.63
PMS1P54277 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.85□□□□□ -1.63
PMS1P54277 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.85□□□□□ -1.63
PMS1P54277 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.85□□□□□ -1.63
PMS1P54277 CYCSP43-201ENST00000438233 310 ntBASIC4.85□□□□□ -1.63
PMS1P54277 AC004866.2-201ENST00000438285 481 ntBASIC4.85□□□□□ -1.63
PMS1P54277 AL121871.1-201ENST00000443413 436 ntBASIC4.85□□□□□ -1.63
PMS1P54277 RPS15AP27-201ENST00000449183 343 ntBASIC4.85□□□□□ -1.63
PMS1P54277 AC090096.1-201ENST00000489168 390 ntBASIC4.85□□□□□ -1.63
PMS1P54277 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.85□□□□□ -1.63
PMS1P54277 HIGD1AP13-201ENST00000509878 289 ntBASIC4.85□□□□□ -1.63
PMS1P54277 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.85□□□□□ -1.63
PMS1P54277 RN7SKP24-201ENST00000515888 284 ntBASIC4.85□□□□□ -1.63
PMS1P54277 RNA5SP497-201ENST00000516081 97 ntBASIC4.85□□□□□ -1.63
PMS1P54277 RNU6-123P-201ENST00000516163 102 ntBASIC4.85□□□□□ -1.63
PMS1P54277 AP000827.1-201ENST00000527814 258 ntBASIC4.85□□□□□ -1.63
PMS1P54277 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.85□□□□□ -1.63
PMS1P54277 ELOCP31-201ENST00000540463 467 ntBASIC4.85□□□□□ -1.63
PMS1P54277 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.85□□□□□ -1.63
PMS1P54277 AL121576.1-201ENST00000556055 276 ntBASIC4.85□□□□□ -1.63
PMS1P54277 RN7SL176P-201ENST00000580352 264 ntBASIC4.85□□□□□ -1.63
PMS1P54277 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.85□□□□□ -1.63
PMS1P54277 AL138889.2-201ENST00000603883 242 ntBASIC4.85□□□□□ -1.63
PMS1P54277 AL158032.1-201ENST00000605401 106 ntBASIC4.85□□□□□ -1.63
PMS1P54277 AC012409.4-201ENST00000612923 249 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms