Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RN7SKP226-201ENST00000364912 300 ntBASIC1.84□□□□□ -2.11
GTF2A1P52655 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.84□□□□□ -2.11
GTF2A1P52655 RPS4XP8-201ENST00000402039 771 ntBASIC1.84□□□□□ -2.11
GTF2A1P52655 AL356432.1-201ENST00000405809 419 ntBASIC1.84□□□□□ -2.11
GTF2A1P52655 AL589880.1-201ENST00000448271 287 ntBASIC1.84□□□□□ -2.11
GTF2A1P52655 AC005297.2-201ENST00000450430 606 ntBASIC1.84□□□□□ -2.11
GTF2A1P52655 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.84□□□□□ -2.11
GTF2A1P52655 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.84□□□□□ -2.11
GTF2A1P52655 RNU6-928P-201ENST00000516876 104 ntBASIC1.84□□□□□ -2.11
GTF2A1P52655 FAM92A1P1-201ENST00000528023 890 ntBASIC1.84□□□□□ -2.11
GTF2A1P52655 MIR4299-201ENST00000577899 72 ntBASIC1.84□□□□□ -2.11
GTF2A1P52655 DNAJC19P3-201ENST00000594491 331 ntBASIC1.84□□□□□ -2.11
GTF2A1P52655 AC040174.2-201ENST00000602701 465 ntBASIC1.84□□□□□ -2.11
GTF2A1P52655 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.84□□□□□ -2.11
GTF2A1P52655 AC073968.1-201ENST00000618594 637 ntBASIC1.84□□□□□ -2.11
GTF2A1P52655 AC009950.2-201ENST00000636548 183 ntBASIC1.84□□□□□ -2.11
GTF2A1P52655 TPTE2P4-201ENST00000258589 1605 ntBASIC1.84□□□□□ -2.12
GTF2A1P52655 AC006020.1-201ENST00000420179 1854 ntBASIC1.84□□□□□ -2.12
GTF2A1P52655 AC080128.1-201ENST00000474389 1917 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 WWP1P1-201ENST00000466609 2769 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 MTND5P6-201ENST00000422338 1798 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 SNORD48-201ENST00000364953 64 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 SNORA36C-201ENST00000384289 132 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
GTF2A1P52655 AL031679.1-201ENST00000400616 525 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 AL356057.1-202ENST00000402263 756 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 MTND4LP20-201ENST00000402379 270 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 ATF1P1-201ENST00000406040 927 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.83□□□□□ -2.12
GTF2A1P52655 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.83□□□□□ -2.12
GTF2A1P52655 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.83□□□□□ -2.12
GTF2A1P52655 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.83□□□□□ -2.12
GTF2A1P52655 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.83□□□□□ -2.12
GTF2A1P52655 snoU109.1-201ENST00000459339 135 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 KLF3P2-201ENST00000465138 268 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 RNU6-970P-201ENST00000516312 107 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.83□□□□□ -2.12
GTF2A1P52655 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
GTF2A1P52655 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.83□□□□□ -2.12
GTF2A1P52655 CBX3P7-201ENST00000532876 502 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.83□□□□□ -2.12
GTF2A1P52655 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.83□□□□□ -2.12
GTF2A1P52655 MIR3200-201ENST00000580767 85 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 AP002826.1-201ENST00000608835 315 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
GTF2A1P52655 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.83□□□□□ -2.12
GTF2A1P52655 AC111188.2-201ENST00000529697 1387 ntBASIC1.83□□□□□ -2.12
GTF2A1P52655 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
GTF2A1P52655 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
GTF2A1P52655 RNU6-1197P-201ENST00000391183 107 ntBASIC1.82□□□□□ -2.12
GTF2A1P52655 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.82□□□□□ -2.12
GTF2A1P52655 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.82□□□□□ -2.12
GTF2A1P52655 AL353729.1-201ENST00000425044 720 ntBASIC1.82□□□□□ -2.12
GTF2A1P52655 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.82□□□□□ -2.12
GTF2A1P52655 AC027124.2-201ENST00000428249 105 ntBASIC1.82□□□□□ -2.12
GTF2A1P52655 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.82□□□□□ -2.12
GTF2A1P52655 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
GTF2A1P52655 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.82□□□□□ -2.12
GTF2A1P52655 FGF7P5-201ENST00000441829 291 ntBASIC1.82□□□□□ -2.12
GTF2A1P52655 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.82□□□□□ -2.12
GTF2A1P52655 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
GTF2A1P52655 KATNBL1P4-201ENST00000503545 918 ntBASIC1.82□□□□□ -2.12
GTF2A1P52655 AC147055.4-201ENST00000504399 745 ntBASIC1.82□□□□□ -2.12
GTF2A1P52655 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.82□□□□□ -2.12
GTF2A1P52655 AC108043.1-201ENST00000512696 574 ntBASIC1.82□□□□□ -2.12
GTF2A1P52655 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.82□□□□□ -2.12
GTF2A1P52655 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.82□□□□□ -2.12
GTF2A1P52655 AC017100.2-201ENST00000584628 355 ntBASIC1.82□□□□□ -2.12
GTF2A1P52655 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.82□□□□□ -2.12
GTF2A1P52655 AC109454.4-201ENST00000623411 649 ntBASIC1.82□□□□□ -2.12
GTF2A1P52655 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
GTF2A1P52655 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.81□□□□□ -2.12
GTF2A1P52655 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
GTF2A1P52655 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
GTF2A1P52655 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
GTF2A1P52655 RNA5SP387-201ENST00000364226 106 ntBASIC1.81□□□□□ -2.12
GTF2A1P52655 RNU6-670P-201ENST00000364312 104 ntBASIC1.81□□□□□ -2.12
GTF2A1P52655 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.81□□□□□ -2.12
GTF2A1P52655 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.81□□□□□ -2.12
GTF2A1P52655 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.81□□□□□ -2.12
GTF2A1P52655 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.81□□□□□ -2.12
GTF2A1P52655 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.81□□□□□ -2.12
GTF2A1P52655 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.81□□□□□ -2.12
GTF2A1P52655 AC005002.1-201ENST00000447458 540 ntBASIC1.81□□□□□ -2.12
GTF2A1P52655 AC055855.1-201ENST00000489563 579 ntBASIC1.81□□□□□ -2.12
GTF2A1P52655 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.81□□□□□ -2.12
GTF2A1P52655 PCNAP1-201ENST00000505363 709 ntBASIC1.81□□□□□ -2.12
GTF2A1P52655 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.81□□□□□ -2.12
GTF2A1P52655 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.81□□□□□ -2.12
GTF2A1P52655 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.81□□□□□ -2.12
GTF2A1P52655 CYCSP2-201ENST00000558168 301 ntBASIC1.81□□□□□ -2.12
GTF2A1P52655 AC068135.2-201ENST00000569293 1028 ntBASIC1.81□□□□□ -2.12
GTF2A1P52655 AC002487.1-201ENST00000604565 994 ntBASIC1.81□□□□□ -2.12
GTF2A1P52655 AC005000.2-201ENST00000605468 310 ntBASIC1.81□□□□□ -2.12
GTF2A1P52655 AC040168.1-201ENST00000623594 991 ntBASIC1.81□□□□□ -2.12
GTF2A1P52655 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
GTF2A1P52655 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
GTF2A1P52655 SNORA5B-201ENST00000363786 132 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 RNU6-270P-201ENST00000364131 105 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AL136372.1-201ENST00000403060 228 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms