Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNA4P43681 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.15□□□□□ -1.58
CHRNA4P43681 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.15□□□□□ -1.58
CHRNA4P43681 HAUS6P2-201ENST00000433254 2404 ntBASIC5.15□□□□□ -1.58
CHRNA4P43681 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNA4P43681 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CHRNA4P43681 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CHRNA4P43681 AC107081.3-201ENST00000612715 2034 ntBASIC5.15□□□□□ -1.58
CHRNA4P43681 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.15□□□□□ -1.58
CHRNA4P43681 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CHRNA4P43681 RPL23P2-201ENST00000320371 421 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 SNORA74A-201ENST00000364089 198 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 RNU6-715P-201ENST00000365204 103 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 Y_RNA.343-201ENST00000365354 112 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 SNORA2.3-201ENST00000383920 135 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 RNU6-708P-201ENST00000384217 107 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 MIR137-201ENST00000385223 102 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 RN7SKP114-201ENST00000410327 279 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNA4P43681 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNA4P43681 DAP3P1-201ENST00000441522 278 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 AC008267.6-201ENST00000441664 139 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 AL389915.2-201ENST00000454576 441 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 RN7SL610P-201ENST00000463845 291 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 RPS18P6-201ENST00000476880 458 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 RN7SL30P-201ENST00000488416 306 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNA4P43681 OR51K1P-201ENST00000510214 950 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 AC074133.1-201ENST00000515696 183 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 RNA5SP230-201ENST00000517039 122 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.15□□□□□ -1.59
CHRNA4P43681 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.15□□□□□ -1.59
CHRNA4P43681 MIR4660-201ENST00000583549 74 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 ELOCP5-201ENST00000604924 333 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNA4P43681 HSPA8P14-201ENST00000552265 1805 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CHRNA4P43681 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CHRNA4P43681 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNA4P43681 LINC02555-201ENST00000563933 1951 ntBASIC5.15□□□□□ -1.59
CHRNA4P43681 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA4P43681 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA4P43681 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA4P43681 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA4P43681 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CHRNA4P43681 IRF5P1-201ENST00000504852 2164 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CHRNA4P43681 AP005435.3-201ENST00000531260 3198 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 RNA5SP443-201ENST00000363083 132 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 MIR223-201ENST00000385204 110 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 SNORA69.1-201ENST00000390904 137 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 AC017079.2-201ENST00000416102 485 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.14□□□□□ -1.59
CHRNA4P43681 RPS12P5-201ENST00000423449 371 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 AC093414.1-201ENST00000434712 514 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 TPT1P13-201ENST00000449760 499 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 AC091179.1-201ENST00000461606 579 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 AC091180.1-201ENST00000462104 372 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 RPL9P9-202ENST00000466501 579 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.14□□□□□ -1.59
CHRNA4P43681 AC087190.1-201ENST00000484462 480 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 AC107032.1-201ENST00000485945 480 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.14□□□□□ -1.59
CHRNA4P43681 AL133153.1-201ENST00000557756 303 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.14□□□□□ -1.59
CHRNA4P43681 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.14□□□□□ -1.59
CHRNA4P43681 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.14□□□□□ -1.59
CHRNA4P43681 AL161616.1-201ENST00000611867 286 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.14□□□□□ -1.59
CHRNA4P43681 AC000123.2-201ENST00000623124 461 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA4P43681 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA4P43681 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA4P43681 AC008725.1-201ENST00000605123 2263 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 EXOC5P1-201ENST00000510543 1969 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CHRNA4P43681 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.14□□□□□ -1.59
CHRNA4P43681 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.14□□□□□ -1.59
CHRNA4P43681 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA4P43681 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.14□□□□□ -1.59
CHRNA4P43681 AC114947.2-201ENST00000565748 2125 ntBASIC5.14□□□□□ -1.59
CHRNA4P43681 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA4P43681 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
CHRNA4P43681 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA4P43681 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA4P43681 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA4P43681 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA4P43681 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA4P43681 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.13□□□□□ -1.59
CHRNA4P43681 AL031595.2-201ENST00000624215 19071 ntBASIC5.13□□□□□ -1.59
CHRNA4P43681 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA4P43681 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.13□□□□□ -1.59
CHRNA4P43681 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.13□□□□□ -1.59
CHRNA4P43681 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA4P43681 Y_RNA.568-201ENST00000384742 113 ntBASIC5.13□□□□□ -1.59
CHRNA4P43681 Y_RNA.592-201ENST00000410274 109 ntBASIC5.13□□□□□ -1.59
CHRNA4P43681 RPL23AP36-201ENST00000413895 458 ntBASIC5.13□□□□□ -1.59
CHRNA4P43681 AL139148.1-201ENST00000427122 680 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms