Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC097468.3-201ENST00000607956 456 ntBASIC1.38□□□□□ -2.19
HTTP42858 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.38□□□□□ -2.19
HTTP42858 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HTTP42858 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HTTP42858 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.38□□□□□ -2.19
HTTP42858 AP000560.1-201ENST00000624150 1937 ntBASIC1.38□□□□□ -2.19
HTTP42858 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HTTP42858 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.37□□□□□ -2.19
HTTP42858 SNORD121B-201ENST00000458838 81 ntBASIC1.37□□□□□ -2.19
HTTP42858 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.37□□□□□ -2.19
HTTP42858 ATG10-AS1-201ENST00000504846 648 ntBASIC1.37□□□□□ -2.19
HTTP42858 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.37□□□□□ -2.19
HTTP42858 HSPE1P11-201ENST00000339579 310 ntBASIC1.37□□□□□ -2.19
HTTP42858 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.37□□□□□ -2.19
HTTP42858 RPL31P35-201ENST00000431058 377 ntBASIC1.37□□□□□ -2.19
HTTP42858 Z85994.2-201ENST00000434327 452 ntBASIC1.37□□□□□ -2.19
HTTP42858 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.37□□□□□ -2.19
HTTP42858 VN1R96P-201ENST00000446052 858 ntBASIC1.37□□□□□ -2.19
HTTP42858 AL109653.1-201ENST00000603091 248 ntBASIC1.37□□□□□ -2.19
HTTP42858 AC091488.1-201ENST00000604239 660 ntBASIC1.37□□□□□ -2.19
HTTP42858 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
HTTP42858 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HTTP42858 AC018630.2-201ENST00000534866 2403 ntBASIC1.37□□□□□ -2.19
HTTP42858 RNU6-716P-201ENST00000365621 103 ntBASIC1.37□□□□□ -2.19
HTTP42858 MIR4448-201ENST00000584360 86 ntBASIC1.37□□□□□ -2.19
HTTP42858 GLUD1P4-201ENST00000590914 418 ntBASIC1.37□□□□□ -2.19
HTTP42858 AL137072.1-201ENST00000603444 466 ntBASIC1.37□□□□□ -2.19
HTTP42858 AL138955.1-201ENST00000622881 1040 ntBASIC1.37□□□□□ -2.19
HTTP42858 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
HTTP42858 RN7SKP200-201ENST00000410564 320 ntBASIC1.36□□□□□ -2.19
HTTP42858 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.36□□□□□ -2.19
HTTP42858 AL031659.1-201ENST00000447075 539 ntBASIC1.36□□□□□ -2.19
HTTP42858 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.36□□□□□ -2.19
HTTP42858 AC087190.1-201ENST00000484462 480 ntBASIC1.36□□□□□ -2.19
HTTP42858 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
HTTP42858 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.36□□□□□ -2.19
HTTP42858 AL358176.2-201ENST00000425769 204 ntBASIC1.36□□□□□ -2.19
HTTP42858 SNRPGP13-201ENST00000442212 177 ntBASIC1.36□□□□□ -2.19
HTTP42858 AC090821.2-201ENST00000523552 176 ntBASIC1.36□□□□□ -2.19
HTTP42858 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.36□□□□□ -2.19
HTTP42858 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.36□□□□□ -2.19
HTTP42858 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.35□□□□□ -2.19
HTTP42858 UBE2V1P13-201ENST00000436983 439 ntBASIC1.35□□□□□ -2.19
HTTP42858 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.35□□□□□ -2.19
HTTP42858 AC118942.1-201ENST00000529674 1035 ntBASIC1.35□□□□□ -2.19
HTTP42858 MIR3973-201ENST00000579824 107 ntBASIC1.35□□□□□ -2.19
HTTP42858 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.35□□□□□ -2.19
HTTP42858 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
HTTP42858 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HTTP42858 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HTTP42858 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.35□□□□□ -2.19
HTTP42858 AC107015.1-201ENST00000466902 747 ntBASIC1.35□□□□□ -2.19
HTTP42858 OOSP1P2-201ENST00000579644 351 ntBASIC1.35□□□□□ -2.19
HTTP42858 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.35□□□□□ -2.19
HTTP42858 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.35□□□□□ -2.19
HTTP42858 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HTTP42858 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.35□□□□□ -2.19
HTTP42858 MTND5P21-201ENST00000531961 522 ntBASIC1.35□□□□□ -2.19
HTTP42858 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.35□□□□□ -2.19
HTTP42858 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
HTTP42858 ARF4P2-201ENST00000430209 526 ntBASIC1.34□□□□□ -2.19
HTTP42858 NEFMP1-201ENST00000443423 1006 ntBASIC1.34□□□□□ -2.19
HTTP42858 AL109741.2-201ENST00000455561 343 ntBASIC1.34□□□□□ -2.19
HTTP42858 AC025755.1-201ENST00000521306 278 ntBASIC1.34□□□□□ -2.19
HTTP42858 AL049779.4-201ENST00000604500 156 ntBASIC1.34□□□□□ -2.19
HTTP42858 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HTTP42858 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.34□□□□□ -2.2
HTTP42858 RWDD4P2-201ENST00000426392 563 ntBASIC1.34□□□□□ -2.2
HTTP42858 RWDD4P1-201ENST00000488019 565 ntBASIC1.34□□□□□ -2.2
HTTP42858 RNA5SP330-201ENST00000517096 96 ntBASIC1.34□□□□□ -2.2
HTTP42858 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.34□□□□□ -2.2
HTTP42858 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.34□□□□□ -2.2
HTTP42858 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.34□□□□□ -2.2
HTTP42858 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.34□□□□□ -2.2
HTTP42858 RNU6-198P-201ENST00000384258 104 ntBASIC1.33□□□□□ -2.2
HTTP42858 AL445183.3-201ENST00000414168 502 ntBASIC1.33□□□□□ -2.2
HTTP42858 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
HTTP42858 FO624990.1-201ENST00000636373 85 ntBASIC1.33□□□□□ -2.2
HTTP42858 RNU1-78P-201ENST00000391248 165 ntBASIC1.33□□□□□ -2.2
HTTP42858 AP004607.1-201ENST00000524456 203 ntBASIC1.33□□□□□ -2.2
HTTP42858 AC006270.2-201ENST00000578523 652 ntBASIC1.33□□□□□ -2.2
HTTP42858 AC019155.1-201ENST00000382242 574 ntBASIC1.33□□□□□ -2.2
HTTP42858 SNORA18.2-201ENST00000383865 132 ntBASIC1.33□□□□□ -2.2
HTTP42858 Y_RNA.390-201ENST00000383932 102 ntBASIC1.33□□□□□ -2.2
HTTP42858 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
HTTP42858 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.33□□□□□ -2.2
HTTP42858 RPL23AP62-201ENST00000463396 453 ntBASIC1.33□□□□□ -2.2
HTTP42858 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.33□□□□□ -2.2
HTTP42858 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.33□□□□□ -2.2
HTTP42858 AC073413.2-201ENST00000604332 360 ntBASIC1.33□□□□□ -2.2
HTTP42858 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
HTTP42858 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.32□□□□□ -2.2
HTTP42858 AC107032.1-201ENST00000485945 480 ntBASIC1.32□□□□□ -2.2
HTTP42858 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.32□□□□□ -2.2
HTTP42858 AC123912.5-201ENST00000605470 343 ntBASIC1.32□□□□□ -2.2
HTTP42858 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.32□□□□□ -2.2
HTTP42858 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.32□□□□□ -2.2
HTTP42858 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HTTP42858 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.32□□□□□ -2.2
HTTP42858 MTCYBP35-201ENST00000503630 1137 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms