Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.61□□□□□ -1.83
USP8P40818 U3.45-201ENST00000607547 219 ntBASIC3.61□□□□□ -1.83
USP8P40818 AC080013.4-201ENST00000607624 649 ntBASIC3.61□□□□□ -1.83
USP8P40818 AC091965.4-201ENST00000607691 587 ntBASIC3.61□□□□□ -1.83
USP8P40818 AC073968.1-201ENST00000618594 637 ntBASIC3.61□□□□□ -1.83
USP8P40818 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.61□□□□□ -1.83
USP8P40818 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USP8P40818 AL356473.1-201ENST00000406203 1408 ntBASIC3.61□□□□□ -1.83
USP8P40818 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP8P40818 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.6□□□□□ -1.83
USP8P40818 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP8P40818 RNU6-28P-201ENST00000362378 107 ntBASIC3.6□□□□□ -1.83
USP8P40818 RNA5SP50-201ENST00000363731 107 ntBASIC3.6□□□□□ -1.83
USP8P40818 RNU6-263P-201ENST00000363811 107 ntBASIC3.6□□□□□ -1.83
USP8P40818 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
USP8P40818 RNU6-533P-201ENST00000384144 107 ntBASIC3.6□□□□□ -1.83
USP8P40818 Y_RNA.493-201ENST00000384422 102 ntBASIC3.6□□□□□ -1.83
USP8P40818 RNU6-297P-201ENST00000384636 107 ntBASIC3.6□□□□□ -1.83
USP8P40818 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
USP8P40818 RNU1-101P-201ENST00000391171 127 ntBASIC3.6□□□□□ -1.83
USP8P40818 MIR887-201ENST00000401258 79 ntBASIC3.6□□□□□ -1.83
USP8P40818 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.6□□□□□ -1.83
USP8P40818 RN7SKP27-201ENST00000410684 333 ntBASIC3.6□□□□□ -1.83
USP8P40818 Y_RNA.619-201ENST00000410951 90 ntBASIC3.6□□□□□ -1.83
USP8P40818 RNA5SP344-201ENST00000411081 104 ntBASIC3.6□□□□□ -1.83
USP8P40818 MTCO1P17-201ENST00000411522 491 ntBASIC3.6□□□□□ -1.83
USP8P40818 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.6□□□□□ -1.83
USP8P40818 HMGN1P14-201ENST00000412459 517 ntBASIC3.6□□□□□ -1.83
USP8P40818 MTATP6P27-201ENST00000416987 621 ntBASIC3.6□□□□□ -1.83
USP8P40818 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.6□□□□□ -1.83
USP8P40818 AC104651.1-201ENST00000427559 735 ntBASIC3.6□□□□□ -1.83
USP8P40818 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.6□□□□□ -1.83
USP8P40818 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.6□□□□□ -1.83
USP8P40818 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.6□□□□□ -1.83
USP8P40818 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.6□□□□□ -1.83
USP8P40818 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.6□□□□□ -1.83
USP8P40818 RPL7P36-201ENST00000444633 681 ntBASIC3.6□□□□□ -1.83
USP8P40818 AL590365.1-201ENST00000450788 243 ntBASIC3.6□□□□□ -1.83
USP8P40818 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.6□□□□□ -1.83
USP8P40818 Z82190.1-201ENST00000454534 490 ntBASIC3.6□□□□□ -1.83
USP8P40818 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
USP8P40818 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.6□□□□□ -1.83
USP8P40818 OR5H5P-201ENST00000503164 928 ntBASIC3.6□□□□□ -1.83
USP8P40818 AC022447.3-201ENST00000506865 495 ntBASIC3.6□□□□□ -1.83
USP8P40818 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
USP8P40818 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.6□□□□□ -1.83
USP8P40818 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.6□□□□□ -1.83
USP8P40818 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
USP8P40818 APOOP4-201ENST00000513530 597 ntBASIC3.6□□□□□ -1.83
USP8P40818 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.6□□□□□ -1.83
USP8P40818 MTCYBP41-201ENST00000528913 1123 ntBASIC3.6□□□□□ -1.83
USP8P40818 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.6□□□□□ -1.83
USP8P40818 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.6□□□□□ -1.83
USP8P40818 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.6□□□□□ -1.83
USP8P40818 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.6□□□□□ -1.83
USP8P40818 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.6□□□□□ -1.83
USP8P40818 ZNF415P1-201ENST00000582279 1166 ntBASIC3.6□□□□□ -1.83
USP8P40818 AC073648.5-201ENST00000603502 305 ntBASIC3.6□□□□□ -1.83
USP8P40818 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.6□□□□□ -1.83
USP8P40818 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP8P40818 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.6□□□□□ -1.83
USP8P40818 AC017071.1-201ENST00000564407 2204 ntBASIC3.6□□□□□ -1.83
USP8P40818 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP8P40818 NUP58P1-201ENST00000502546 1738 ntBASIC3.59□□□□□ -1.83
USP8P40818 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP8P40818 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.59□□□□□ -1.83
USP8P40818 Y_RNA.41-201ENST00000362646 102 ntBASIC3.59□□□□□ -1.83
USP8P40818 RNU6-853P-201ENST00000364306 107 ntBASIC3.59□□□□□ -1.83
USP8P40818 RNU4-91P-201ENST00000364778 135 ntBASIC3.59□□□□□ -1.83
USP8P40818 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP8P40818 Y_RNA.548-201ENST00000384656 105 ntBASIC3.59□□□□□ -1.83
USP8P40818 SNORA40.3-201ENST00000390964 122 ntBASIC3.59□□□□□ -1.83
USP8P40818 RNU6-192P-201ENST00000391253 100 ntBASIC3.59□□□□□ -1.83
USP8P40818 RPL21P3-201ENST00000395517 478 ntBASIC3.59□□□□□ -1.83
USP8P40818 Y_RNA.599-201ENST00000410489 109 ntBASIC3.59□□□□□ -1.83
USP8P40818 AC012065.2-201ENST00000421295 375 ntBASIC3.59□□□□□ -1.83
USP8P40818 AC244098.2-201ENST00000422068 99 ntBASIC3.59□□□□□ -1.83
USP8P40818 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.59□□□□□ -1.83
USP8P40818 AC091862.1-201ENST00000438016 1100 ntBASIC3.59□□□□□ -1.83
USP8P40818 MUPP-201ENST00000438111 566 ntBASIC3.59□□□□□ -1.83
USP8P40818 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.59□□□□□ -1.83
USP8P40818 USP9YP12-201ENST00000450481 570 ntBASIC3.59□□□□□ -1.83
USP8P40818 MTND1P27-201ENST00000451117 902 ntBASIC3.59□□□□□ -1.83
USP8P40818 RBMY2UP-201ENST00000453474 324 ntBASIC3.59□□□□□ -1.83
USP8P40818 AC146507.2-201ENST00000460608 476 ntBASIC3.59□□□□□ -1.83
USP8P40818 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.59□□□□□ -1.83
USP8P40818 AP001025.2-201ENST00000490908 477 ntBASIC3.59□□□□□ -1.83
USP8P40818 RPL21P129-201ENST00000491732 478 ntBASIC3.59□□□□□ -1.83
USP8P40818 AP002812.1-201ENST00000495378 474 ntBASIC3.59□□□□□ -1.83
USP8P40818 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.59□□□□□ -1.83
USP8P40818 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.59□□□□□ -1.83
USP8P40818 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.59□□□□□ -1.83
USP8P40818 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.59□□□□□ -1.83
USP8P40818 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
USP8P40818 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.59□□□□□ -1.83
USP8P40818 RNU6-405P-201ENST00000516637 110 ntBASIC3.59□□□□□ -1.83
USP8P40818 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.59□□□□□ -1.83
USP8P40818 AC079089.3-201ENST00000603094 673 ntBASIC3.59□□□□□ -1.83
USP8P40818 RPL23AP92-201ENST00000603609 255 ntBASIC3.59□□□□□ -1.83
USP8P40818 AC112187.2-201ENST00000604345 283 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms