Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL360182.1-201ENST00000397433 468 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 AL121834.1-202ENST00000404494 277 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 RPL23AP48-201ENST00000406913 488 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 RN7SKP177-201ENST00000410567 355 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 AC080125.1-201ENST00000414888 684 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 AC245054.2-201ENST00000415639 319 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC12P31275 AC244098.2-201ENST00000422068 99 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC12P31275 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC12P31275 PRDX3P3-201ENST00000447765 522 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXC12P31275 MLLT10P2-201ENST00000506434 249 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 AC098976.1-201ENST00000513014 541 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 RNU6-1332P-201ENST00000516666 104 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC12P31275 RNU6-323P-201ENST00000521915 107 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 AL355836.1-201ENST00000555951 870 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 MTCO3P23-201ENST00000561363 289 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC12P31275 FAM60BP-201ENST00000578364 658 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC12P31275 AP001836.1-201ENST00000604675 523 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC12P31275 AC116312.1-201ENST00000606841 314 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 MIR15A-201ENST00000607334 83 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 FAM157A-202ENST00000615155 405 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 AC244517.12-201ENST00000623581 663 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 AC022418.1-201ENST00000624118 445 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC12P31275 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HOXC12P31275 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC12P31275 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC12P31275 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HOXC12P31275 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC12P31275 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HOXC12P31275 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC12P31275 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC12P31275 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC12P31275 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HOXC12P31275 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC12P31275 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC12P31275 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC12P31275 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC12P31275 RNU5A-1-201ENST00000362698 116 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 Y_RNA.197-201ENST00000364004 102 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC12P31275 RNU6-398P-201ENST00000384143 109 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 AL139397.2-201ENST00000404529 772 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 AL445189.1-201ENST00000405722 338 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXC12P31275 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC12P31275 RN7SKP114-201ENST00000410327 279 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 FTH1P6-201ENST00000430768 320 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 RPL23AP69-201ENST00000431134 458 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 GPM6BP2-201ENST00000432046 144 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC12P31275 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC12P31275 GPM6BP1-201ENST00000446387 144 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC12P31275 AL354714.3-201ENST00000447284 493 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC12P31275 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC12P31275 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC12P31275 SNORD108-201ENST00000459332 71 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 AC117503.1-201ENST00000472241 394 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 HSPE1P6-201ENST00000479457 291 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC12P31275 RN7SL244P-201ENST00000493405 297 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC12P31275 Y_RNA.711-201ENST00000516993 102 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 AP004371.1-201ENST00000525240 214 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC12P31275 RPL23AP87-202ENST00000573039 466 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 MIR4270-201ENST00000581799 70 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC12P31275 AC012119.1-201ENST00000603184 222 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC12P31275 ATP5A1P2-202ENST00000616464 443 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 SALL4P2-201ENST00000423288 2910 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC12P31275 MFSD8-216ENST00000641147 4009 ntBASIC4.49□□□□□ -1.69
HOXC12P31275 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC12P31275 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC12P31275 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC12P31275 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
HOXC12P31275 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HOXC12P31275 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HOXC12P31275 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HOXC12P31275 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC12P31275 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC12P31275 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC12P31275 Y_RNA.135-201ENST00000363439 95 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 RNU6-173P-201ENST00000364215 104 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 SNORA63C-201ENST00000364578 129 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 RNA5SP455-201ENST00000365190 119 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 RNU6-45P-201ENST00000384471 107 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 AC097374.1-203ENST00000400783 485 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 AL391417.1-201ENST00000404100 426 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms