Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL356320.2-201ENST00000417263 507 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 RPS3AP37-201ENST00000419176 745 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXA9P31269 AC007435.1-201ENST00000421086 415 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 NANOGP5-201ENST00000424456 877 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 TMSB4XP1-201ENST00000424567 135 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXA9P31269 MUPP-201ENST00000438111 566 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 AC011816.1-201ENST00000441346 546 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXA9P31269 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.71□□□□□ -1.98
HOXA9P31269 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.71□□□□□ -1.98
HOXA9P31269 AL513124.1-201ENST00000450410 614 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXA9P31269 AIG1P1-201ENST00000503376 148 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 AC113347.3-201ENST00000509113 148 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 MTCYBP16-201ENST00000509187 1129 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXA9P31269 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.71□□□□□ -1.98
HOXA9P31269 AC087808.1-201ENST00000520501 361 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.71□□□□□ -1.98
HOXA9P31269 AC027176.1-201ENST00000560204 514 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 AC138915.2-201ENST00000569776 97 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.71□□□□□ -1.98
HOXA9P31269 MTCO2P2-201ENST00000591258 225 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.71□□□□□ -1.98
HOXA9P31269 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXA9P31269 AC005046.1-201ENST00000608515 625 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 AC009974.1-201ENST00000608881 455 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HOXA9P31269 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HOXA9P31269 AC026241.1-201ENST00000517873 2142 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 Z99496.1-201ENST00000469424 1477 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HOXA9P31269 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HOXA9P31269 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HOXA9P31269 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
HOXA9P31269 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXA9P31269 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXA9P31269 SNORA51.6-201ENST00000384151 125 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 RNU6-339P-201ENST00000384310 107 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 MIR518C-201ENST00000384822 101 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 RPS4XP7-201ENST00000406274 780 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 RNU2-42P-201ENST00000410697 113 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 MTATP6P20-201ENST00000414147 562 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXA9P31269 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXA9P31269 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXA9P31269 AC092648.1-201ENST00000425870 423 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXA9P31269 RPL23AP16-201ENST00000441715 421 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXA9P31269 RFC5P1-201ENST00000454419 874 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 DUXAP8-207ENST00000456786 622 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXA9P31269 YWHAEP4-201ENST00000505390 198 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 AC114322.1-201ENST00000506771 926 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HOXA9P31269 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXA9P31269 AC008837.2-201ENST00000513076 418 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 RN7SKP24-201ENST00000515888 284 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 RNU6-1261P-201ENST00000517194 104 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXA9P31269 AP001372.4-201ENST00000524889 472 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXA9P31269 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXA9P31269 SNRPGP16-201ENST00000533275 226 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 MTCYBP27-201ENST00000555160 670 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 AC023813.2-201ENST00000564321 469 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HOXA9P31269 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXA9P31269 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXA9P31269 AC023043.3-201ENST00000593113 385 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 AC025588.3-201ENST00000604182 274 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 AP001330.4-201ENST00000604350 154 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 AC069545.1-201ENST00000605671 358 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 AC027449.1-201ENST00000608890 407 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 AP001521.1-201ENST00000609150 300 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 DUXAP10-204ENST00000612052 616 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 AL050303.3-201ENST00000613704 284 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXA9P31269 CR381653.2-201ENST00000624041 768 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 MKKS-204ENST00000639674 192 ntBASIC2.7□□□□□ -1.98
HOXA9P31269 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
HOXA9P31269 AC109315.1-201ENST00000584143 1347 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 ZNF658B-202ENST00000615961 3375 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.69□□□□□ -1.98
HOXA9P31269 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXA9P31269 VTRNA1-1-201ENST00000363120 99 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 SNORD116.1-201ENST00000365628 92 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 RNU6-730P-201ENST00000383954 104 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 MIR592-201ENST00000384959 97 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 RNA5SP252-201ENST00000391131 119 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 ERHP2-201ENST00000402323 299 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HOXA9P31269 AL023807.1-201ENST00000407932 359 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 AL450338.1-201ENST00000407987 512 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 SNORA3.2-201ENST00000408221 125 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 RNU2-25P-201ENST00000411041 191 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms