Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.17□□□□□ -2.06
CLIP1P30622 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.17□□□□□ -2.06
CLIP1P30622 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.17□□□□□ -2.06
CLIP1P30622 AC023813.2-201ENST00000564321 469 ntBASIC2.17□□□□□ -2.06
CLIP1P30622 MIR6078-201ENST00000611069 100 ntBASIC2.17□□□□□ -2.06
CLIP1P30622 AC079597.1-201ENST00000624306 508 ntBASIC2.17□□□□□ -2.06
CLIP1P30622 MTCO1P4-201ENST00000520516 1409 ntBASIC2.17□□□□□ -2.06
CLIP1P30622 AP000648.3-201ENST00000623539 4507 ntBASIC2.17□□□□□ -2.06
CLIP1P30622 Y_RNA.191-201ENST00000363972 113 ntBASIC2.17□□□□□ -2.06
CLIP1P30622 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.17□□□□□ -2.06
CLIP1P30622 RPL23AP16-201ENST00000441715 421 ntBASIC2.17□□□□□ -2.06
CLIP1P30622 AC234775.1-201ENST00000454247 670 ntBASIC2.17□□□□□ -2.06
CLIP1P30622 AC022493.1-201ENST00000492984 337 ntBASIC2.17□□□□□ -2.06
CLIP1P30622 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.17□□□□□ -2.06
CLIP1P30622 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.17□□□□□ -2.06
CLIP1P30622 AC068338.1-201ENST00000565567 176 ntBASIC2.17□□□□□ -2.06
CLIP1P30622 RNU6-600P-201ENST00000362524 99 ntBASIC2.16□□□□□ -2.06
CLIP1P30622 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CLIP1P30622 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.16□□□□□ -2.06
CLIP1P30622 RNU6-1218P-201ENST00000458990 108 ntBASIC2.16□□□□□ -2.06
CLIP1P30622 AC080013.2-201ENST00000460866 323 ntBASIC2.16□□□□□ -2.06
CLIP1P30622 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.16□□□□□ -2.06
CLIP1P30622 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.16□□□□□ -2.06
CLIP1P30622 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.16□□□□□ -2.06
CLIP1P30622 MTCO1P47-201ENST00000523889 1271 ntBASIC2.16□□□□□ -2.06
CLIP1P30622 SNORD84-203ENST00000584275 78 ntBASIC2.16□□□□□ -2.06
CLIP1P30622 RMST_2.1-201ENST00000617263 136 ntBASIC2.16□□□□□ -2.06
CLIP1P30622 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
CLIP1P30622 RNU6-234P-201ENST00000365229 104 ntBASIC2.15□□□□□ -2.07
CLIP1P30622 Z85994.2-201ENST00000434327 452 ntBASIC2.15□□□□□ -2.07
CLIP1P30622 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CLIP1P30622 MRPL42P6-201ENST00000486397 371 ntBASIC2.15□□□□□ -2.07
CLIP1P30622 CDC42P4-201ENST00000510507 563 ntBASIC2.15□□□□□ -2.07
CLIP1P30622 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.15□□□□□ -2.07
CLIP1P30622 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
CLIP1P30622 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.15□□□□□ -2.07
CLIP1P30622 AC087373.1-201ENST00000524920 491 ntBASIC2.15□□□□□ -2.07
CLIP1P30622 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.15□□□□□ -2.07
CLIP1P30622 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.15□□□□□ -2.07
CLIP1P30622 AC004241.3-201ENST00000611728 517 ntBASIC2.15□□□□□ -2.07
CLIP1P30622 AP003122.6-201ENST00000623831 495 ntBASIC2.15□□□□□ -2.07
CLIP1P30622 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.15□□□□□ -2.07
CLIP1P30622 MIR203B-201ENST00000636080 86 ntBASIC2.15□□□□□ -2.07
CLIP1P30622 AC130650.2-201ENST00000618736 2403 ntBASIC2.15□□□□□ -2.07
CLIP1P30622 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CLIP1P30622 AL359851.1-201ENST00000569460 4997 ntBASIC2.14□□□□□ -2.07
CLIP1P30622 AC135776.4-201ENST00000624300 1904 ntBASIC2.14□□□□□ -2.07
CLIP1P30622 RNU6-582P-201ENST00000362989 107 ntBASIC2.14□□□□□ -2.07
CLIP1P30622 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.14□□□□□ -2.07
CLIP1P30622 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.14□□□□□ -2.07
CLIP1P30622 HMGB1P45-201ENST00000435986 653 ntBASIC2.14□□□□□ -2.07
CLIP1P30622 SNRPGP13-201ENST00000442212 177 ntBASIC2.14□□□□□ -2.07
CLIP1P30622 AL121594.1-201ENST00000475906 575 ntBASIC2.14□□□□□ -2.07
CLIP1P30622 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.14□□□□□ -2.07
CLIP1P30622 AL354943.1-201ENST00000572103 781 ntBASIC2.14□□□□□ -2.07
CLIP1P30622 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.14□□□□□ -2.07
CLIP1P30622 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.14□□□□□ -2.07
CLIP1P30622 AL390240.1-201ENST00000612950 384 ntBASIC2.14□□□□□ -2.07
CLIP1P30622 AC007275.1-201ENST00000621243 671 ntBASIC2.14□□□□□ -2.07
CLIP1P30622 AP000560.1-201ENST00000624150 1937 ntBASIC2.13□□□□□ -2.07
CLIP1P30622 Y_RNA.112-201ENST00000363250 102 ntBASIC2.13□□□□□ -2.07
CLIP1P30622 SNORA51.2-201ENST00000364595 132 ntBASIC2.13□□□□□ -2.07
CLIP1P30622 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.13□□□□□ -2.07
CLIP1P30622 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.13□□□□□ -2.07
CLIP1P30622 FO393415.2-201ENST00000480085 343 ntBASIC2.13□□□□□ -2.07
CLIP1P30622 AC023050.1-201ENST00000498198 304 ntBASIC2.13□□□□□ -2.07
CLIP1P30622 AC092436.3-201ENST00000511788 257 ntBASIC2.13□□□□□ -2.07
CLIP1P30622 AP003033.1-201ENST00000527244 415 ntBASIC2.13□□□□□ -2.07
CLIP1P30622 AP005136.1-201ENST00000579765 429 ntBASIC2.13□□□□□ -2.07
CLIP1P30622 AL359740.1-201ENST00000624340 592 ntBASIC2.13□□□□□ -2.07
CLIP1P30622 CENPCP1-201ENST00000533085 2578 ntBASIC2.12□□□□□ -2.07
CLIP1P30622 AL136133.1-201ENST00000413694 376 ntBASIC2.12□□□□□ -2.07
CLIP1P30622 RPS6P15-201ENST00000431996 751 ntBASIC2.12□□□□□ -2.07
CLIP1P30622 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CLIP1P30622 HMGN1P7-201ENST00000491722 313 ntBASIC2.12□□□□□ -2.07
CLIP1P30622 RAC1P5-201ENST00000512182 576 ntBASIC2.12□□□□□ -2.07
CLIP1P30622 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.12□□□□□ -2.07
CLIP1P30622 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.12□□□□□ -2.07
CLIP1P30622 AL133507.1-201ENST00000605269 557 ntBASIC2.12□□□□□ -2.07
CLIP1P30622 OR10AB1P-201ENST00000609613 938 ntBASIC2.12□□□□□ -2.07
CLIP1P30622 AL110115.1-201ENST00000614396 364 ntBASIC2.12□□□□□ -2.07
CLIP1P30622 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.12□□□□□ -2.07
CLIP1P30622 HMGB1P5-201ENST00000255320 642 ntBASIC2.11□□□□□ -2.07
CLIP1P30622 SNORA40.6-201ENST00000391153 128 ntBASIC2.11□□□□□ -2.07
CLIP1P30622 CCNB2P1-201ENST00000399411 1150 ntBASIC2.11□□□□□ -2.07
CLIP1P30622 PIGFP3-201ENST00000441918 722 ntBASIC2.11□□□□□ -2.07
CLIP1P30622 AC023790.1-201ENST00000482174 347 ntBASIC2.11□□□□□ -2.07
CLIP1P30622 NBEAP1-201ENST00000554452 979 ntBASIC2.11□□□□□ -2.07
CLIP1P30622 RN7SL622P-201ENST00000585292 275 ntBASIC2.11□□□□□ -2.07
CLIP1P30622 AC068831.7-201ENST00000616954 363 ntBASIC2.11□□□□□ -2.07
CLIP1P30622 AL031601.2-202ENST00000622650 282 ntBASIC2.11□□□□□ -2.07
CLIP1P30622 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.11□□□□□ -2.07
CLIP1P30622 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.11□□□□□ -2.07
CLIP1P30622 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CLIP1P30622 RNU2-71P-201ENST00000411395 189 ntBASIC2.1□□□□□ -2.07
CLIP1P30622 IFNA20P-201ENST00000436840 528 ntBASIC2.1□□□□□ -2.07
CLIP1P30622 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.1□□□□□ -2.07
CLIP1P30622 IPO7P1-201ENST00000442031 636 ntBASIC2.1□□□□□ -2.07
CLIP1P30622 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.1□□□□□ -2.07
CLIP1P30622 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms