Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RPL21P23-201ENST00000446654 460 ntBASIC5.56□□□□□ -1.52
RXRBP28702 PTMAP3-201ENST00000447474 330 ntBASIC5.56□□□□□ -1.52
RXRBP28702 AC104563.1-201ENST00000476147 376 ntBASIC5.56□□□□□ -1.52
RXRBP28702 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.56□□□□□ -1.52
RXRBP28702 AC104136.1-201ENST00000512969 394 ntBASIC5.56□□□□□ -1.52
RXRBP28702 AC103843.2-201ENST00000530523 682 ntBASIC5.56□□□□□ -1.52
RXRBP28702 MIR4472-2-201ENST00000582069 67 ntBASIC5.56□□□□□ -1.52
RXRBP28702 MIR4424-201ENST00000585257 86 ntBASIC5.56□□□□□ -1.52
RXRBP28702 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.56□□□□□ -1.52
RXRBP28702 AL670379.11-201ENST00000604059 253 ntBASIC5.56□□□□□ -1.52
RXRBP28702 AL670379.10-201ENST00000604330 253 ntBASIC5.56□□□□□ -1.52
RXRBP28702 AL137843.1-201ENST00000605078 385 ntBASIC5.56□□□□□ -1.52
RXRBP28702 AL670379.12-201ENST00000605291 253 ntBASIC5.56□□□□□ -1.52
RXRBP28702 AL670379.9-201ENST00000605428 253 ntBASIC5.56□□□□□ -1.52
RXRBP28702 AC107294.1-201ENST00000609524 467 ntBASIC5.56□□□□□ -1.52
RXRBP28702 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RXRBP28702 HMGB1P24-202ENST00000615653 685 ntBASIC5.56□□□□□ -1.52
RXRBP28702 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.56□□□□□ -1.52
RXRBP28702 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.56□□□□□ -1.52
RXRBP28702 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.56□□□□□ -1.52
RXRBP28702 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RXRBP28702 AC093849.1-201ENST00000563631 2209 ntBASIC5.56□□□□□ -1.52
RXRBP28702 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RXRBP28702 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.55□□□□□ -1.52
RXRBP28702 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RXRBP28702 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RXRBP28702 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RXRBP28702 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
RXRBP28702 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RXRBP28702 Y_RNA.22-201ENST00000362492 102 ntBASIC5.55□□□□□ -1.52
RXRBP28702 Y_RNA.149-201ENST00000363558 117 ntBASIC5.55□□□□□ -1.52
RXRBP28702 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RXRBP28702 AC117470.1-201ENST00000381974 330 ntBASIC5.55□□□□□ -1.52
RXRBP28702 RNU6-26P-201ENST00000383985 107 ntBASIC5.55□□□□□ -1.52
RXRBP28702 SNORD37.1-201ENST00000390968 65 ntBASIC5.55□□□□□ -1.52
RXRBP28702 EIF5P1-201ENST00000400019 1231 ntBASIC5.55□□□□□ -1.52
RXRBP28702 AL031679.1-201ENST00000400616 525 ntBASIC5.55□□□□□ -1.52
RXRBP28702 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.55□□□□□ -1.52
RXRBP28702 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
RXRBP28702 RNU6-847P-201ENST00000411115 108 ntBASIC5.55□□□□□ -1.52
RXRBP28702 BX323014.1-201ENST00000412876 237 ntBASIC5.55□□□□□ -1.52
RXRBP28702 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.55□□□□□ -1.52
RXRBP28702 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.55□□□□□ -1.52
RXRBP28702 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RXRBP28702 AL160004.2-201ENST00000432935 350 ntBASIC5.55□□□□□ -1.52
RXRBP28702 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.55□□□□□ -1.52
RXRBP28702 EIF4A1P11-201ENST00000451239 222 ntBASIC5.55□□□□□ -1.52
RXRBP28702 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.55□□□□□ -1.52
RXRBP28702 MTND1P9-201ENST00000453775 944 ntBASIC5.55□□□□□ -1.52
RXRBP28702 U8.20-201ENST00000459445 131 ntBASIC5.55□□□□□ -1.52
RXRBP28702 AC106707.2-201ENST00000484182 374 ntBASIC5.55□□□□□ -1.52
RXRBP28702 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.55□□□□□ -1.52
RXRBP28702 AC098591.2-201ENST00000510152 315 ntBASIC5.55□□□□□ -1.52
RXRBP28702 DEFB109D-201ENST00000529497 240 ntBASIC5.55□□□□□ -1.52
RXRBP28702 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.55□□□□□ -1.52
RXRBP28702 AL161670.1-201ENST00000554348 137 ntBASIC5.55□□□□□ -1.52
RXRBP28702 AL118558.2-201ENST00000556294 238 ntBASIC5.55□□□□□ -1.52
RXRBP28702 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.55□□□□□ -1.52
RXRBP28702 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.55□□□□□ -1.52
RXRBP28702 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.55□□□□□ -1.52
RXRBP28702 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.55□□□□□ -1.52
RXRBP28702 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RXRBP28702 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
RXRBP28702 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RXRBP28702 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RXRBP28702 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RXRBP28702 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RXRBP28702 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RXRBP28702 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.55□□□□□ -1.52
RXRBP28702 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.54□□□□□ -1.52
RXRBP28702 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.54□□□□□ -1.52
RXRBP28702 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
RXRBP28702 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RXRBP28702 Y_RNA.476-201ENST00000384347 108 ntBASIC5.54□□□□□ -1.52
RXRBP28702 CEACAMP1-201ENST00000434624 1035 ntBASIC5.54□□□□□ -1.52
RXRBP28702 RPS20P5-201ENST00000434808 360 ntBASIC5.54□□□□□ -1.52
RXRBP28702 RPL23AP46-201ENST00000438548 490 ntBASIC5.54□□□□□ -1.52
RXRBP28702 AP1S2P1-201ENST00000457344 379 ntBASIC5.54□□□□□ -1.52
RXRBP28702 AL049874.2-201ENST00000492636 288 ntBASIC5.54□□□□□ -1.52
RXRBP28702 MTCYBP40-201ENST00000509390 1135 ntBASIC5.54□□□□□ -1.52
RXRBP28702 AC021146.1-201ENST00000511202 716 ntBASIC5.54□□□□□ -1.52
RXRBP28702 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.54□□□□□ -1.52
RXRBP28702 MIR3146-201ENST00000580367 79 ntBASIC5.54□□□□□ -1.52
RXRBP28702 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.54□□□□□ -1.52
RXRBP28702 AL353997.4-201ENST00000586196 166 ntBASIC5.54□□□□□ -1.52
RXRBP28702 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.54□□□□□ -1.52
RXRBP28702 MIR7151-201ENST00000617477 60 ntBASIC5.54□□□□□ -1.52
RXRBP28702 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RXRBP28702 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.54□□□□□ -1.52
RXRBP28702 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RXRBP28702 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.54□□□□□ -1.52
RXRBP28702 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RXRBP28702 MTND5P19-201ENST00000424872 1794 ntBASIC5.54□□□□□ -1.52
RXRBP28702 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RXRBP28702 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
RXRBP28702 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RXRBP28702 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RXRBP28702 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RXRBP28702 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
RXRBP28702 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms