Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DMBP28068 AC114322.1-201ENST00000506771 926 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 AC118282.2-201ENST00000508739 374 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DMBP28068 AC022784.5-201ENST00000522241 437 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DMBP28068 OR4R2P-201ENST00000530815 597 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 AC068339.2-201ENST00000534395 618 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DMBP28068 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.79□□□□□ -2.12
HLA-DMBP28068 AC093519.1-201ENST00000566109 298 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 MTCO1P40-201ENST00000574371 625 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 DNAJC19P3-201ENST00000594491 331 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 KATNBL1P5-201ENST00000605015 517 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.79□□□□□ -2.12
HLA-DMBP28068 AC013412.1-201ENST00000610687 192 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 VN1R9P-201ENST00000614184 867 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 AC079395.3-201ENST00000615161 484 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DMBP28068 CTSLP2-204ENST00000629029 392 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DMBP28068 OR4G11P-202ENST00000642116 1414 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 ZNF849P-201ENST00000594711 1566 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HLA-DMBP28068 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.79□□□□□ -2.12
HLA-DMBP28068 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
HLA-DMBP28068 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
HLA-DMBP28068 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HLA-DMBP28068 ELF2P3-201ENST00000445099 1506 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HLA-DMBP28068 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HLA-DMBP28068 MIRLET7G-201ENST00000362280 84 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 OR1L1-202ENST00000373686 1083 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 RNU6-878P-201ENST00000384578 110 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 RSL24D1P4-201ENST00000400938 484 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 TMSB4XP8-201ENST00000402089 135 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AL359511.1-201ENST00000402970 211 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 RNU2-43P-201ENST00000410306 190 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 TMSB4XP6-201ENST00000415187 135 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DMBP28068 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 BEND7P1-201ENST00000422058 457 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DMBP28068 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 TMSB4XP1-201ENST00000424567 135 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AL358075.3-201ENST00000426289 226 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AL512637.2-201ENST00000431287 1256 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 MYL8P-204ENST00000431574 518 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 OR4K11P-201ENST00000431829 904 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 RPS15AP28-201ENST00000435088 386 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AL445687.1-201ENST00000439946 251 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 RPL26P6-201ENST00000440913 438 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AC009296.1-201ENST00000443146 155 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DMBP28068 AL592447.1-201ENST00000447592 540 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 MTCO1P48-201ENST00000448024 1096 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DMBP28068 AC107626.1-201ENST00000471084 183 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 RN7SL429P-201ENST00000479090 223 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 HSPE1P6-201ENST00000479457 291 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AL135752.1-201ENST00000479477 471 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 RN7SL489P-201ENST00000486185 223 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 RPL36AP51-201ENST00000487216 318 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 RN7SL327P-201ENST00000488659 223 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AC079804.2-201ENST00000490376 200 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.78□□□□□ -2.12
HLA-DMBP28068 AC113420.1-201ENST00000507903 571 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 RNU6-885P-201ENST00000516607 104 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 SNORA76.2-201ENST00000517095 137 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DMBP28068 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DMBP28068 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.78□□□□□ -2.12
HLA-DMBP28068 CR383656.7-201ENST00000548164 174 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DMBP28068 AC040174.2-201ENST00000602701 465 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AC067747.1-201ENST00000608026 250 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AP005137.2-201ENST00000609238 400 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 MIR6840-201ENST00000611937 71 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 RN7SL853P-201ENST00000617250 223 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AC011330.2-201ENST00000621680 635 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 AL512506.2-201ENST00000624472 458 ntBASIC1.78□□□□□ -2.12
HLA-DMBP28068 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HLA-DMBP28068 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.78□□□□□ -2.13
HLA-DMBP28068 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.13
HLA-DMBP28068 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
HLA-DMBP28068 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
HLA-DMBP28068 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 SNORA6-201ENST00000384033 151 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 SNORA36C-201ENST00000384289 132 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 RNU2-47P-201ENST00000410649 186 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 AL445183.3-201ENST00000414168 502 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms