Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 CR383656.7-201ENST00000548164 174 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 AC008127.2-201ENST00000549925 1075 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 AC023824.2-201ENST00000566185 400 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 AC008739.3-201ENST00000603262 127 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 MIR6798-201ENST00000612887 67 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 AC245884.12-201ENST00000615364 59 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 AC090772.4-201ENST00000623599 362 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 CU459211.1-201ENST00000635667 749 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DMAP28067 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DMAP28067 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DMAP28067 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DMAP28067 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DMAP28067 MIR422A-201ENST00000362286 90 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 RNU6-236P-201ENST00000363886 106 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DMAP28067 RNU6-298P-201ENST00000390888 96 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DMAP28067 ATP5F1P3-201ENST00000397213 657 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 AL138827.1-201ENST00000402666 306 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 AL513331.1-201ENST00000411908 397 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 AL592148.1-201ENST00000413568 445 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 Z85995.1-201ENST00000415547 335 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 SPA17P1-201ENST00000416656 452 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.19□□□□□ -2.06
HLA-DMAP28067 AL158156.1-201ENST00000422509 473 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 NDUFB4P7-201ENST00000423198 363 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.19□□□□□ -2.06
HLA-DMAP28067 WARS2P1-201ENST00000429678 537 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 AC011816.1-201ENST00000441346 546 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DMAP28067 USP9YP34-201ENST00000453983 808 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 AL139109.1-201ENST00000455491 297 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 AC104629.1-201ENST00000494226 508 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 AC147055.4-201ENST00000504399 745 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 BOLA3P3-201ENST00000505182 232 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 AC016550.1-201ENST00000505348 785 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 RN7SKP31-201ENST00000516354 278 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 BTF3P12-201ENST00000519620 469 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 AC027309.2-201ENST00000520566 192 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DMAP28067 MTCYBP27-201ENST00000555160 670 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.19□□□□□ -2.06
HLA-DMAP28067 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DMAP28067 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.19□□□□□ -2.06
HLA-DMAP28067 AC068135.2-201ENST00000569293 1028 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 MIR5694-201ENST00000581190 76 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 RPS15AP11-201ENST00000594193 385 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 AL355877.2-201ENST00000603670 358 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 HMGB1P24-202ENST00000615653 685 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 AC084757.4-201ENST00000616350 526 ntBASIC2.19□□□□□ -2.06
HLA-DMAP28067 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HLA-DMAP28067 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.19□□□□□ -2.06
HLA-DMAP28067 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DMAP28067 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DMAP28067 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DMAP28067 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DMAP28067 SNRPEP3-201ENST00000338402 276 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 SNORA38-201ENST00000363946 132 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 RNU1-112P-201ENST00000364401 164 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 SNORA18.3-201ENST00000384122 132 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 Y_RNA.548-201ENST00000384656 105 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 MIR7-3-201ENST00000384898 110 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DMAP28067 AL162578.1-201ENST00000406202 378 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 MTATP6P19-201ENST00000413797 659 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DMAP28067 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 DPPA3P1-201ENST00000448050 469 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC092155.2-201ENST00000454675 477 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 RN7SL807P-201ENST00000470923 297 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 RPS29P26-201ENST00000477483 171 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC079804.2-201ENST00000490376 200 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC008427.1-201ENST00000503102 655 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC113420.1-201ENST00000507903 571 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC010460.2-201ENST00000509054 677 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC108043.1-201ENST00000512696 574 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC022483.1-201ENST00000514020 567 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 RNA5SP282-201ENST00000516355 108 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 SNORA67.7-201ENST00000516664 135 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms