Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.19□□□□□ -1.74
POLR2AP24928 RNU6-420P-201ENST00000458780 107 ntBASIC4.19□□□□□ -1.74
POLR2AP24928 U3.44-201ENST00000458938 192 ntBASIC4.19□□□□□ -1.74
POLR2AP24928 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.19□□□□□ -1.74
POLR2AP24928 AC083798.1-201ENST00000472671 131 ntBASIC4.19□□□□□ -1.74
POLR2AP24928 AC112204.1-201ENST00000502591 103 ntBASIC4.19□□□□□ -1.74
POLR2AP24928 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.19□□□□□ -1.74
POLR2AP24928 IGKV2-26-201ENST00000518305 343 ntBASIC4.19□□□□□ -1.74
POLR2AP24928 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.19□□□□□ -1.74
POLR2AP24928 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.19□□□□□ -1.74
POLR2AP24928 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.19□□□□□ -1.74
POLR2AP24928 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.19□□□□□ -1.74
POLR2AP24928 EIF4BP1-201ENST00000554881 351 ntBASIC4.19□□□□□ -1.74
POLR2AP24928 AC093249.1-201ENST00000567049 203 ntBASIC4.19□□□□□ -1.74
POLR2AP24928 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.19□□□□□ -1.74
POLR2AP24928 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.19□□□□□ -1.74
POLR2AP24928 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
POLR2AP24928 NUP58P1-201ENST00000502546 1738 ntBASIC4.19□□□□□ -1.74
POLR2AP24928 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
POLR2AP24928 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
POLR2AP24928 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.19□□□□□ -1.74
POLR2AP24928 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
POLR2AP24928 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
POLR2AP24928 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
POLR2AP24928 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.18□□□□□ -1.74
POLR2AP24928 RNU2-22P-201ENST00000411266 212 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 OR6C66P-201ENST00000414917 930 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
POLR2AP24928 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.18□□□□□ -1.74
POLR2AP24928 RN7SL504P-201ENST00000494496 287 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.18□□□□□ -1.74
POLR2AP24928 AC114786.4-201ENST00000508771 728 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AC021146.3-201ENST00000511911 260 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AC022861.1-201ENST00000522981 663 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.18□□□□□ -1.74
POLR2AP24928 SULT1C2P1-202ENST00000562418 459 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AC012603.1-201ENST00000606424 528 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
POLR2AP24928 C2orf27A-204ENST00000623058 969 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
POLR2AP24928 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
POLR2AP24928 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.18□□□□□ -1.74
POLR2AP24928 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
POLR2AP24928 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
POLR2AP24928 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
POLR2AP24928 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
POLR2AP24928 Y_RNA.58-201ENST00000362807 102 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 Y_RNA.154-201ENST00000363624 102 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 RNY3P1-201ENST00000365085 102 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 RNY3-201ENST00000365484 102 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 Y_RNA.490-201ENST00000384413 102 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.18□□□□□ -1.74
POLR2AP24928 PDCL2P1-201ENST00000419302 352 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AC008065.1-201ENST00000428525 348 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.18□□□□□ -1.74
POLR2AP24928 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.18□□□□□ -1.74
POLR2AP24928 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.18□□□□□ -1.74
POLR2AP24928 RPS15AP1-201ENST00000457423 391 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AP000893.1-201ENST00000474462 794 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.18□□□□□ -1.74
POLR2AP24928 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.18□□□□□ -1.74
POLR2AP24928 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.18□□□□□ -1.74
POLR2AP24928 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.18□□□□□ -1.74
POLR2AP24928 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.18□□□□□ -1.74
POLR2AP24928 AC005668.1-201ENST00000571142 476 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 MIR3171-201ENST00000584270 74 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AC112191.3-201ENST00000604371 277 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 RNU6-89P-201ENST00000606519 100 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.18□□□□□ -1.74
POLR2AP24928 AC130324.3-201ENST00000614165 542 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AC009248.2-201ENST00000619826 254 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 AC068254.2-201ENST00000623938 3577 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
POLR2AP24928 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
POLR2AP24928 AC114546.3-201ENST00000623582 1734 ntBASIC4.18□□□□□ -1.74
POLR2AP24928 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
POLR2AP24928 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.17□□□□□ -1.74
POLR2AP24928 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
POLR2AP24928 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
POLR2AP24928 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
POLR2AP24928 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
POLR2AP24928 Y_RNA.132-201ENST00000363421 102 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 Y_RNA.133-201ENST00000363428 110 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 RNU6-115P-201ENST00000364310 107 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 SNORD42.2-201ENST00000365570 69 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 RNU6-729P-201ENST00000384399 107 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
POLR2AP24928 AC073136.2-201ENST00000417282 849 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 ISCA1P6-201ENST00000427740 390 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 MTND6P18-201ENST00000439477 513 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.17□□□□□ -1.74
POLR2AP24928 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.17□□□□□ -1.74
POLR2AP24928 DDX3P2-201ENST00000446138 111 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.17□□□□□ -1.74
POLR2AP24928 RPL21P8-201ENST00000465083 535 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms