Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFX1P22670 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.64□□□□□ -1.51
RFX1P22670 MAPK10-349ENST00000641767 3661 ntBASIC5.64□□□□□ -1.51
RFX1P22670 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RFX1P22670 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.64□□□□□ -1.51
RFX1P22670 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.64□□□□□ -1.51
RFX1P22670 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.64□□□□□ -1.51
RFX1P22670 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFX1P22670 RNU6-490P-201ENST00000362985 107 ntBASIC5.64□□□□□ -1.51
RFX1P22670 MIR578-201ENST00000384828 96 ntBASIC5.64□□□□□ -1.51
RFX1P22670 MIR514A1-201ENST00000385133 98 ntBASIC5.64□□□□□ -1.51
RFX1P22670 MIR301A-201ENST00000385261 86 ntBASIC5.64□□□□□ -1.51
RFX1P22670 AL109941.1-201ENST00000401925 229 ntBASIC5.64□□□□□ -1.51
RFX1P22670 AC007738.1-201ENST00000413892 348 ntBASIC5.64□□□□□ -1.51
RFX1P22670 AC093655.2-201ENST00000425735 631 ntBASIC5.64□□□□□ -1.51
RFX1P22670 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RFX1P22670 AL451062.2-201ENST00000427515 271 ntBASIC5.64□□□□□ -1.51
RFX1P22670 AC079780.1-201ENST00000428259 207 ntBASIC5.64□□□□□ -1.51
RFX1P22670 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.64□□□□□ -1.51
RFX1P22670 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.64□□□□□ -1.51
RFX1P22670 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.64□□□□□ -1.51
RFX1P22670 AC103987.1-201ENST00000473394 348 ntBASIC5.64□□□□□ -1.51
RFX1P22670 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RFX1P22670 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.64□□□□□ -1.51
RFX1P22670 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.64□□□□□ -1.51
RFX1P22670 RNU6-307P-201ENST00000516743 106 ntBASIC5.64□□□□□ -1.51
RFX1P22670 RNU6-143P-201ENST00000516942 93 ntBASIC5.64□□□□□ -1.51
RFX1P22670 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.64□□□□□ -1.51
RFX1P22670 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RFX1P22670 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.64□□□□□ -1.51
RFX1P22670 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.64□□□□□ -1.51
RFX1P22670 EDDM3DP-201ENST00000554692 434 ntBASIC5.64□□□□□ -1.51
RFX1P22670 RPL10P14-201ENST00000565265 298 ntBASIC5.64□□□□□ -1.51
RFX1P22670 MIR1273C-201ENST00000578669 77 ntBASIC5.64□□□□□ -1.51
RFX1P22670 MIR4503-201ENST00000582187 83 ntBASIC5.64□□□□□ -1.51
RFX1P22670 AC005899.2-201ENST00000584353 90 ntBASIC5.64□□□□□ -1.51
RFX1P22670 AC069307.1-201ENST00000602820 447 ntBASIC5.64□□□□□ -1.51
RFX1P22670 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.64□□□□□ -1.51
RFX1P22670 MIR378J-201ENST00000611988 109 ntBASIC5.64□□□□□ -1.51
RFX1P22670 AC005344.1-201ENST00000613391 459 ntBASIC5.64□□□□□ -1.51
RFX1P22670 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.64□□□□□ -1.51
RFX1P22670 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RFX1P22670 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RFX1P22670 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RFX1P22670 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.64□□□□□ -1.51
RFX1P22670 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RFX1P22670 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFX1P22670 ZNF807-201ENST00000328088 1707 ntBASIC5.63□□□□□ -1.51
RFX1P22670 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFX1P22670 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFX1P22670 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFX1P22670 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.63□□□□□ -1.51
RFX1P22670 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RFX1P22670 AC138393.1-203ENST00000327086 343 ntBASIC5.63□□□□□ -1.51
RFX1P22670 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFX1P22670 MIR568-201ENST00000385036 95 ntBASIC5.63□□□□□ -1.51
RFX1P22670 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RFX1P22670 LAP3P1-201ENST00000403648 294 ntBASIC5.63□□□□□ -1.51
RFX1P22670 AC245028.1-201ENST00000423259 256 ntBASIC5.63□□□□□ -1.51
RFX1P22670 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.63□□□□□ -1.51
RFX1P22670 USMG5P1-201ENST00000425964 177 ntBASIC5.63□□□□□ -1.51
RFX1P22670 HMGN2P27-201ENST00000427352 270 ntBASIC5.63□□□□□ -1.51
RFX1P22670 HSPD1P21-201ENST00000436541 245 ntBASIC5.63□□□□□ -1.51
RFX1P22670 RPS24P6-201ENST00000452670 400 ntBASIC5.63□□□□□ -1.51
RFX1P22670 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.63□□□□□ -1.51
RFX1P22670 snoU13.24-201ENST00000458998 104 ntBASIC5.63□□□□□ -1.51
RFX1P22670 RN7SL481P-201ENST00000477764 299 ntBASIC5.63□□□□□ -1.51
RFX1P22670 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.63□□□□□ -1.51
RFX1P22670 MTND3P25-201ENST00000509243 135 ntBASIC5.63□□□□□ -1.51
RFX1P22670 RNA5SP373-201ENST00000517271 95 ntBASIC5.63□□□□□ -1.51
RFX1P22670 COX6CP5-201ENST00000527162 228 ntBASIC5.63□□□□□ -1.51
RFX1P22670 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.63□□□□□ -1.51
RFX1P22670 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.63□□□□□ -1.51
RFX1P22670 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.63□□□□□ -1.51
RFX1P22670 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.63□□□□□ -1.51
RFX1P22670 AC010653.1-201ENST00000571108 881 ntBASIC5.63□□□□□ -1.51
RFX1P22670 BNIP3P16-201ENST00000589779 534 ntBASIC5.63□□□□□ -1.51
RFX1P22670 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.63□□□□□ -1.51
RFX1P22670 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.63□□□□□ -1.51
RFX1P22670 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.63□□□□□ -1.51
RFX1P22670 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.63□□□□□ -1.51
RFX1P22670 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFX1P22670 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.63□□□□□ -1.51
RFX1P22670 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.63□□□□□ -1.51
RFX1P22670 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RFX1P22670 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
RFX1P22670 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFX1P22670 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RFX1P22670 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFX1P22670 Z95331.1-201ENST00000623075 23112 ntBASIC5.62□□□□□ -1.51
RFX1P22670 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RFX1P22670 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.62□□□□□ -1.51
RFX1P22670 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFX1P22670 AC005005.4-201ENST00000623789 16698 ntBASIC5.62□□□□□ -1.51
RFX1P22670 SNORA17.1-201ENST00000362945 126 ntBASIC5.62□□□□□ -1.51
RFX1P22670 U3.2-201ENST00000362981 210 ntBASIC5.62□□□□□ -1.51
RFX1P22670 Y_RNA.364-201ENST00000365532 101 ntBASIC5.62□□□□□ -1.51
RFX1P22670 RNU6-1329P-201ENST00000365664 107 ntBASIC5.62□□□□□ -1.51
RFX1P22670 RNY1P14-201ENST00000384426 108 ntBASIC5.62□□□□□ -1.51
RFX1P22670 MIR548F4-201ENST00000408515 105 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms