Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HMGB3P20-201ENST00000417997 600 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 AL589872.1-201ENST00000426602 288 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 AL139415.2-201ENST00000431968 163 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.29□□□□□ -1.72
KCNA3P22001 AC107083.1-201ENST00000439643 279 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 PSPHP1-201ENST00000450062 261 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 IFNWP4-201ENST00000453148 294 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.29□□□□□ -1.72
KCNA3P22001 KCTD9P5-201ENST00000504141 1170 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 AC108078.1-201ENST00000508073 725 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 RN7SKP234-201ENST00000517173 224 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 IGKV2D-36-201ENST00000518643 226 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 AP003181.2-201ENST00000528941 181 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNA3P22001 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.29□□□□□ -1.72
KCNA3P22001 CENPUP2-201ENST00000555897 1186 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 MIR3945-201ENST00000581853 98 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 AL355812.1-201ENST00000603215 216 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 AC090970.3-201ENST00000612566 866 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 AL592295.2-201ENST00000612578 206 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 AC090517.2-201ENST00000614966 680 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 AC068880.5-201ENST00000624331 290 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 AC124864.2-201ENST00000624736 186 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.29□□□□□ -1.72
KCNA3P22001 PABPC1P7-201ENST00000413177 1513 ntBASIC4.29□□□□□ -1.72
KCNA3P22001 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCNA3P22001 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCNA3P22001 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KCNA3P22001 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KCNA3P22001 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNA3P22001 RNA5SP322-201ENST00000363617 119 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 MT-TC-201ENST00000387405 66 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 U3.29-201ENST00000391296 212 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 AL139095.1-201ENST00000404326 391 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 AL078595.1-201ENST00000404458 226 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 MIR1250-201ENST00000408098 113 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 RNU4-47P-201ENST00000410876 114 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 RNU6-195P-201ENST00000411352 109 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 AC078974.1-201ENST00000411597 223 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNA3P22001 AC063979.1-201ENST00000415539 377 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 PIGFP2-201ENST00000421400 651 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNA3P22001 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNA3P22001 AL358934.1-201ENST00000432346 324 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 AC108734.1-201ENST00000439549 399 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNA3P22001 MTCO3P20-201ENST00000454926 688 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNA3P22001 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNA3P22001 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNA3P22001 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNA3P22001 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNA3P22001 SETP2-201ENST00000553886 926 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 AL133241.1-201ENST00000556832 487 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 AC245014.2-201ENST00000603689 287 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 AL139286.1-201ENST00000604465 483 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 AC246785.4-201ENST00000605374 287 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 AC121334.2-201ENST00000605387 271 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 AP003355.3-201ENST00000623465 114 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 AC110801.1-201ENST00000623590 212 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.28□□□□□ -1.72
KCNA3P22001 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KCNA3P22001 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNA3P22001 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
KCNA3P22001 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
KCNA3P22001 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
KCNA3P22001 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KCNA3P22001 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNA3P22001 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
KCNA3P22001 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNA3P22001 IPO8P1-201ENST00000455509 3109 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
KCNA3P22001 MIR449A-201ENST00000362113 91 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 MIR422A-201ENST00000362286 90 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 RNU6-359P-201ENST00000365466 108 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.27□□□□□ -1.73
KCNA3P22001 RNU6-339P-201ENST00000384310 107 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 RNU1-89P-201ENST00000384592 164 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 BTF3P7-201ENST00000407097 488 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 MTND4LP11-201ENST00000422184 280 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 USP9YP18-201ENST00000425912 695 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 EZH2P1-201ENST00000431167 291 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
KCNA3P22001 AC021382.1-201ENST00000483523 359 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 COX7A2P2-201ENST00000505291 250 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.27□□□□□ -1.73
KCNA3P22001 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNA3P22001 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.27□□□□□ -1.73
KCNA3P22001 AC123904.2-201ENST00000548059 300 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 HMGB3P26-201ENST00000560051 582 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.27□□□□□ -1.73
KCNA3P22001 MIR4276-201ENST00000584832 70 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 AC004853.1-201ENST00000604902 698 ntBASIC4.27□□□□□ -1.73
KCNA3P22001 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCNA3P22001 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCNA3P22001 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms