Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU6-1004P-201ENST00000516584 111 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.12□□□□□ -2.07
COL5A1P20908 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.12□□□□□ -2.07
COL5A1P20908 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.12□□□□□ -2.07
COL5A1P20908 AC009712.1-201ENST00000564938 316 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
COL5A1P20908 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.12□□□□□ -2.07
COL5A1P20908 VN1R80P-201ENST00000597126 338 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.12□□□□□ -2.07
COL5A1P20908 GAS5-AS1-201ENST00000602767 694 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC011468.4-201ENST00000603942 409 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC107952.2-201ENST00000606048 486 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.12□□□□□ -2.07
COL5A1P20908 AC013470.4-201ENST00000619978 986 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC109454.4-201ENST00000623411 649 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.12□□□□□ -2.07
COL5A1P20908 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL5A1P20908 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.12□□□□□ -2.07
COL5A1P20908 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
COL5A1P20908 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
COL5A1P20908 SNORA31-201ENST00000362607 130 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 U3.15-201ENST00000365398 212 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 RNU1-138P-201ENST00000384093 164 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 MIR221-201ENST00000385135 110 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 SNORA11.4-201ENST00000408823 129 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.11□□□□□ -2.07
COL5A1P20908 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.11□□□□□ -2.07
COL5A1P20908 AC234064.1-201ENST00000436312 247 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 RFC5P1-201ENST00000454419 874 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 USP9YP25-201ENST00000457708 443 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 AC010683.1-201ENST00000473673 378 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 RNU6-311P-201ENST00000516224 102 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 AC007834.2-201ENST00000536310 343 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.11□□□□□ -2.07
COL5A1P20908 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.11□□□□□ -2.07
COL5A1P20908 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.11□□□□□ -2.07
COL5A1P20908 AC090888.2-201ENST00000559765 1144 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 AC145350.1-201ENST00000567426 208 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.11□□□□□ -2.07
COL5A1P20908 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.11□□□□□ -2.07
COL5A1P20908 DUXAP3-201ENST00000603616 594 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 AL139344.1-201ENST00000605228 195 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.11□□□□□ -2.07
COL5A1P20908 AC024060.1-201ENST00000607052 494 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 MIR7973-1-201ENST00000614683 76 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 MTND5P29-201ENST00000458676 1807 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL5A1P20908 SEC63P2-201ENST00000503863 1939 ntBASIC2.11□□□□□ -2.07
COL5A1P20908 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.1□□□□□ -2.07
COL5A1P20908 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
COL5A1P20908 RNU5B-1-201ENST00000363286 116 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 RNU6-317P-201ENST00000384031 107 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 MIR499A-201ENST00000384903 122 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 RNU6-244P-201ENST00000391028 104 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 MCTS2P-201ENST00000394552 546 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.1□□□□□ -2.07
COL5A1P20908 CYCSP49-201ENST00000420810 319 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AL365338.1-201ENST00000422282 858 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.1□□□□□ -2.07
COL5A1P20908 AC129850.1-201ENST00000436203 508 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 HSPE1P28-201ENST00000443139 211 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.1□□□□□ -2.07
COL5A1P20908 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.1□□□□□ -2.07
COL5A1P20908 AC096992.1-201ENST00000459808 709 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC023050.1-201ENST00000498198 304 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC091951.3-201ENST00000504093 246 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC010486.2-201ENST00000505572 483 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 HMGB3P15-201ENST00000507326 574 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC034244.1-201ENST00000507687 207 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.1□□□□□ -2.07
COL5A1P20908 SNORA3.4-201ENST00000515969 96 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC034268.2-201ENST00000571784 482 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.1□□□□□ -2.07
COL5A1P20908 AL022099.1-201ENST00000604551 712 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC025588.2-201ENST00000604851 466 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC007349.4-201ENST00000608114 532 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC004908.3-201ENST00000610248 625 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AL359198.2-201ENST00000611836 194 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 STMN1P1-201ENST00000617809 440 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC139769.3-201ENST00000618383 175 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.1□□□□□ -2.07
COL5A1P20908 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL5A1P20908 MTCO1P6-201ENST00000481192 1384 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 ENSAP3-201ENST00000312710 333 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
COL5A1P20908 RNU6-1242P-201ENST00000391052 103 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 BTF3P8-201ENST00000414577 526 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL5A1P20908 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.1□□□□□ -2.07
COL5A1P20908 RPL7P34-201ENST00000433316 712 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 GTF2IP3-201ENST00000433887 494 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.1□□□□□ -2.07
COL5A1P20908 EEF1A1P39-201ENST00000440791 250 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.1□□□□□ -2.07
COL5A1P20908 AL591719.1-201ENST00000444669 744 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 Z83846.1-201ENST00000446798 265 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.1□□□□□ -2.07
COL5A1P20908 AC092155.2-201ENST00000454675 477 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms