Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.87□□□□□ -1.95
XRCC1P18887 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
XRCC1P18887 Y_RNA.111-201ENST00000363248 100 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 SNORA9.2-201ENST00000365361 133 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.86□□□□□ -1.95
XRCC1P18887 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
XRCC1P18887 FAT1P1-201ENST00000406588 507 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 U3.42-201ENST00000408746 214 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 SSR1P2-201ENST00000415208 787 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 RPL7P10-201ENST00000417407 739 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 AL139281.1-201ENST00000422120 335 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 MTCO2P20-201ENST00000437339 673 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.86□□□□□ -1.95
XRCC1P18887 AL592447.1-201ENST00000447592 540 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.86□□□□□ -1.95
XRCC1P18887 GSTA11P-201ENST00000452866 669 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 RPS29P26-201ENST00000477483 171 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 RN7SL499P-201ENST00000481141 276 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.86□□□□□ -1.95
XRCC1P18887 AC104090.1-201ENST00000506341 1171 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 ARL4AP2-201ENST00000507378 601 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 SNORA70.16-201ENST00000516390 95 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 SCARNA13-201ENST00000516672 275 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.86□□□□□ -1.95
XRCC1P18887 MTCO2P15-201ENST00000532655 656 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.86□□□□□ -1.95
XRCC1P18887 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.86□□□□□ -1.95
XRCC1P18887 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.86□□□□□ -1.95
XRCC1P18887 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.86□□□□□ -1.95
XRCC1P18887 AC023043.3-201ENST00000593113 385 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 AC091057.2-201ENST00000602594 792 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 AL596327.1-201ENST00000603629 213 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.86□□□□□ -1.95
XRCC1P18887 AL137843.1-201ENST00000605078 385 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 AC090186.1-201ENST00000605991 572 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.86□□□□□ -1.95
XRCC1P18887 AC009570.1-201ENST00000609599 745 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
XRCC1P18887 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
XRCC1P18887 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 AP002782.1-201ENST00000623107 614 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.86□□□□□ -1.95
XRCC1P18887 MIR4275-201ENST00000636486 87 ntBASIC2.86□□□□□ -1.95
XRCC1P18887 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.86□□□□□ -1.95
XRCC1P18887 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
XRCC1P18887 AC092447.10-201ENST00000620607 1652 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 AC005832.2-201ENST00000538921 1430 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.85□□□□□ -1.95
XRCC1P18887 GABRG2-229ENST00000641017 3628 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 RPL9P7-201ENST00000330965 580 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
XRCC1P18887 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
XRCC1P18887 RNU6-462P-201ENST00000362659 105 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 RNU6-97P-201ENST00000363387 104 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 RNU6-343P-201ENST00000364709 104 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 SNORA1.3-201ENST00000384676 136 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 MIR181A2-201ENST00000384863 110 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
XRCC1P18887 SNORA26.7-201ENST00000391288 122 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 RNU6-1077P-201ENST00000410506 102 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.85□□□□□ -1.95
XRCC1P18887 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.85□□□□□ -1.95
XRCC1P18887 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.85□□□□□ -1.95
XRCC1P18887 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.85□□□□□ -1.95
XRCC1P18887 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 AL606517.1-201ENST00000446914 387 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 PAXBP1P1-201ENST00000449315 447 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 AC096576.1-201ENST00000489014 359 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.85□□□□□ -1.95
XRCC1P18887 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.85□□□□□ -1.95
XRCC1P18887 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.85□□□□□ -1.95
XRCC1P18887 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.85□□□□□ -1.95
XRCC1P18887 RNU6-56P-201ENST00000516986 93 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.85□□□□□ -1.95
XRCC1P18887 AC023050.2-201ENST00000544968 387 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.85□□□□□ -1.95
XRCC1P18887 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.85□□□□□ -1.95
XRCC1P18887 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.85□□□□□ -1.95
XRCC1P18887 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.85□□□□□ -1.95
XRCC1P18887 AL450336.1-201ENST00000605180 586 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 AC008962.1-201ENST00000605729 304 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 RNU6-88P-201ENST00000606801 100 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 AC027449.1-201ENST00000608890 407 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 MIR6076-201ENST00000617521 113 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
XRCC1P18887 AC006111.3-201ENST00000622137 383 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.85□□□□□ -1.95
XRCC1P18887 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
XRCC1P18887 MAPK10-322ENST00000641485 4530 ntBASIC2.85□□□□□ -1.95
XRCC1P18887 AC008568.2-201ENST00000623862 2313 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
XRCC1P18887 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
XRCC1P18887 AL122016.1-201ENST00000403365 367 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 RPL7P8-201ENST00000411964 730 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.84□□□□□ -1.95
XRCC1P18887 AC083875.1-201ENST00000419509 405 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 TMEM167AP1-201ENST00000423409 219 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.84□□□□□ -1.95
XRCC1P18887 RPS20P5-201ENST00000434808 360 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms