Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.31□□□□□ -1.88
PDGFRAP16234 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.31□□□□□ -1.88
PDGFRAP16234 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.31□□□□□ -1.88
PDGFRAP16234 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.31□□□□□ -1.88
PDGFRAP16234 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.31□□□□□ -1.88
PDGFRAP16234 AC111000.2-201ENST00000507775 550 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 AP004247.1-201ENST00000531556 1289 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.31□□□□□ -1.88
PDGFRAP16234 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.31□□□□□ -1.88
PDGFRAP16234 TRAV37-201ENST00000553906 342 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 AC009094.1-201ENST00000564443 426 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.31□□□□□ -1.88
PDGFRAP16234 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 AC011260.1-201ENST00000578420 472 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.31□□□□□ -1.88
PDGFRAP16234 AC012493.2-201ENST00000595083 291 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PDGFRAP16234 AL603758.1-201ENST00000618654 241 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.31□□□□□ -1.88
PDGFRAP16234 AC091953.5-201ENST00000622919 233 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 AC026422.1-201ENST00000623961 452 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDGFRAP16234 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.31□□□□□ -1.88
PDGFRAP16234 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PDGFRAP16234 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFRAP16234 MTND5P33-201ENST00000571250 1450 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFRAP16234 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFRAP16234 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.3□□□□□ -1.88
PDGFRAP16234 RNU6-805P-201ENST00000365643 106 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFRAP16234 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFRAP16234 RPS4XP3-201ENST00000398541 413 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 RNU4-47P-201ENST00000410876 114 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.3□□□□□ -1.88
PDGFRAP16234 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFRAP16234 AC018630.2-202ENST00000422992 927 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 NDUFB4P7-201ENST00000423198 363 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.3□□□□□ -1.88
PDGFRAP16234 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.3□□□□□ -1.88
PDGFRAP16234 AL512649.1-201ENST00000428997 581 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFRAP16234 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.3□□□□□ -1.88
PDGFRAP16234 RPL35AP22-201ENST00000436855 335 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 FAM103A2P-201ENST00000444122 354 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFRAP16234 AL590664.1-201ENST00000448065 339 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFRAP16234 RN7SL863P-201ENST00000462370 296 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 AC109925.1-201ENST00000478069 331 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFRAP16234 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFRAP16234 SNORA74D-201ENST00000516404 141 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFRAP16234 HMGN1P28-201ENST00000521340 364 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.3□□□□□ -1.88
PDGFRAP16234 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
PDGFRAP16234 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFRAP16234 AC060771.1-201ENST00000582031 164 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 AC008751.2-201ENST00000597885 980 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 BNIP3P23-201ENST00000599655 511 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 BCRP9-201ENST00000605312 388 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 AC100793.4-201ENST00000613683 429 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 AC138932.5-201ENST00000617759 563 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 AC019226.1-201ENST00000625666 515 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.3□□□□□ -1.88
PDGFRAP16234 AC099063.3-201ENST00000642066 185 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFRAP16234 DDX10P1-201ENST00000448545 1933 ntBASIC3.3□□□□□ -1.88
PDGFRAP16234 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFRAP16234 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFRAP16234 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PDGFRAP16234 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFRAP16234 RNA5SP374-201ENST00000362939 125 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 RNU6-769P-201ENST00000384407 104 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 RNU6-1197P-201ENST00000391183 107 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 AL590084.2-201ENST00000401481 382 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 AL359704.1-201ENST00000411586 781 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 RAP1BP1-201ENST00000412709 553 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.29□□□□□ -1.88
PDGFRAP16234 AC234781.2-201ENST00000426370 994 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.29□□□□□ -1.88
PDGFRAP16234 AL356867.1-201ENST00000429623 299 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.29□□□□□ -1.88
PDGFRAP16234 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.29□□□□□ -1.88
PDGFRAP16234 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFRAP16234 AC125238.1-201ENST00000448842 249 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.29□□□□□ -1.88
PDGFRAP16234 OR6K1P-201ENST00000456766 971 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.29□□□□□ -1.88
PDGFRAP16234 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.29□□□□□ -1.88
PDGFRAP16234 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFRAP16234 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.29□□□□□ -1.88
PDGFRAP16234 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.29□□□□□ -1.88
PDGFRAP16234 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.29□□□□□ -1.88
PDGFRAP16234 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.29□□□□□ -1.88
PDGFRAP16234 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.29□□□□□ -1.88
PDGFRAP16234 MIR5004-201ENST00000579078 107 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 AC106791.2-201ENST00000604680 391 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms