Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.6□□□□□ -1.83
PCNAP12004 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
PCNAP12004 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PCNAP12004 AP004289.2-201ENST00000444413 1457 ntBASIC3.6□□□□□ -1.83
PCNAP12004 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.6□□□□□ -1.83
PCNAP12004 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCNAP12004 AC007256.1-201ENST00000392253 2765 ntBASIC3.59□□□□□ -1.83
PCNAP12004 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCNAP12004 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCNAP12004 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PCNAP12004 RNU6-600P-201ENST00000362524 99 ntBASIC3.59□□□□□ -1.83
PCNAP12004 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.59□□□□□ -1.83
PCNAP12004 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
PCNAP12004 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
PCNAP12004 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCNAP12004 RNU6-1042P-201ENST00000384204 107 ntBASIC3.59□□□□□ -1.83
PCNAP12004 Y_RNA.505-201ENST00000384489 102 ntBASIC3.59□□□□□ -1.83
PCNAP12004 AL590704.1-201ENST00000402856 794 ntBASIC3.59□□□□□ -1.83
PCNAP12004 AC127391.1-201ENST00000411737 98 ntBASIC3.59□□□□□ -1.83
PCNAP12004 HMGB3P20-201ENST00000417997 600 ntBASIC3.59□□□□□ -1.83
PCNAP12004 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.59□□□□□ -1.83
PCNAP12004 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.59□□□□□ -1.83
PCNAP12004 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.59□□□□□ -1.83
PCNAP12004 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.59□□□□□ -1.83
PCNAP12004 AC092473.1-201ENST00000441098 221 ntBASIC3.59□□□□□ -1.83
PCNAP12004 TXNP1-201ENST00000441872 371 ntBASIC3.59□□□□□ -1.83
PCNAP12004 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.59□□□□□ -1.83
PCNAP12004 AC079448.1-201ENST00000449377 373 ntBASIC3.59□□□□□ -1.83
PCNAP12004 MTND1P9-201ENST00000453775 944 ntBASIC3.59□□□□□ -1.83
PCNAP12004 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.59□□□□□ -1.83
PCNAP12004 RPS27AP1-201ENST00000475545 471 ntBASIC3.59□□□□□ -1.83
PCNAP12004 RN7SL132P-201ENST00000478131 296 ntBASIC3.59□□□□□ -1.83
PCNAP12004 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.59□□□□□ -1.83
PCNAP12004 AC093278.1-201ENST00000494700 600 ntBASIC3.59□□□□□ -1.83
PCNAP12004 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.59□□□□□ -1.83
PCNAP12004 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.59□□□□□ -1.83
PCNAP12004 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.59□□□□□ -1.83
PCNAP12004 AC093331.1-201ENST00000521474 169 ntBASIC3.59□□□□□ -1.83
PCNAP12004 AC008011.1-201ENST00000545989 227 ntBASIC3.59□□□□□ -1.83
PCNAP12004 SYF2P1-201ENST00000550658 413 ntBASIC3.59□□□□□ -1.83
PCNAP12004 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.59□□□□□ -1.83
PCNAP12004 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.59□□□□□ -1.83
PCNAP12004 FAM60BP-201ENST00000578364 658 ntBASIC3.59□□□□□ -1.83
PCNAP12004 AC004908.2-201ENST00000609090 574 ntBASIC3.59□□□□□ -1.83
PCNAP12004 AC103710.1-201ENST00000610003 901 ntBASIC3.59□□□□□ -1.83
PCNAP12004 AC090970.3-201ENST00000612566 866 ntBASIC3.59□□□□□ -1.83
PCNAP12004 AL133173.2-201ENST00000614270 90 ntBASIC3.59□□□□□ -1.83
PCNAP12004 AC095031.1-201ENST00000623685 672 ntBASIC3.59□□□□□ -1.83
PCNAP12004 AC068724.3-201ENST00000625906 87 ntBASIC3.59□□□□□ -1.83
PCNAP12004 CEP170P1-201ENST00000502249 4587 ntBASIC3.59□□□□□ -1.83
PCNAP12004 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.59□□□□□ -1.84
PCNAP12004 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.59□□□□□ -1.84
PCNAP12004 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCNAP12004 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCNAP12004 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCNAP12004 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PCNAP12004 RN7SKP226-201ENST00000364912 300 ntBASIC3.58□□□□□ -1.84
PCNAP12004 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.58□□□□□ -1.84
PCNAP12004 RNU6-192P-201ENST00000391253 100 ntBASIC3.58□□□□□ -1.84
PCNAP12004 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCNAP12004 RPL23AP32-201ENST00000395315 459 ntBASIC3.58□□□□□ -1.84
PCNAP12004 RPL32P23-201ENST00000397237 405 ntBASIC3.58□□□□□ -1.84
PCNAP12004 HMGN1P24-201ENST00000412282 298 ntBASIC3.58□□□□□ -1.84
PCNAP12004 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.58□□□□□ -1.84
PCNAP12004 UBE2FP1-201ENST00000416536 447 ntBASIC3.58□□□□□ -1.84
PCNAP12004 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.58□□□□□ -1.84
PCNAP12004 MTCO1P39-201ENST00000426148 480 ntBASIC3.58□□□□□ -1.84
PCNAP12004 AL591419.1-201ENST00000427423 339 ntBASIC3.58□□□□□ -1.84
PCNAP12004 AC090774.1-201ENST00000435925 246 ntBASIC3.58□□□□□ -1.84
PCNAP12004 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.58□□□□□ -1.84
PCNAP12004 ARPC3P1-201ENST00000437218 533 ntBASIC3.58□□□□□ -1.84
PCNAP12004 USP9YP15-201ENST00000442391 422 ntBASIC3.58□□□□□ -1.84
PCNAP12004 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.58□□□□□ -1.84
PCNAP12004 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.58□□□□□ -1.84
PCNAP12004 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.58□□□□□ -1.84
PCNAP12004 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.58□□□□□ -1.84
PCNAP12004 AC103987.1-201ENST00000473394 348 ntBASIC3.58□□□□□ -1.84
PCNAP12004 RBM43P1-201ENST00000476891 1081 ntBASIC3.58□□□□□ -1.84
PCNAP12004 AC012181.1-201ENST00000479895 423 ntBASIC3.58□□□□□ -1.84
PCNAP12004 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.58□□□□□ -1.84
PCNAP12004 RPS15AP36-201ENST00000492022 382 ntBASIC3.58□□□□□ -1.84
PCNAP12004 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.58□□□□□ -1.84
PCNAP12004 RN7SKP244-201ENST00000516513 307 ntBASIC3.58□□□□□ -1.84
PCNAP12004 RNA5SP337-201ENST00000517007 109 ntBASIC3.58□□□□□ -1.84
PCNAP12004 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCNAP12004 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.58□□□□□ -1.84
PCNAP12004 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.58□□□□□ -1.84
PCNAP12004 AC087499.8-201ENST00000578406 226 ntBASIC3.58□□□□□ -1.84
PCNAP12004 MIR3682-201ENST00000581338 84 ntBASIC3.58□□□□□ -1.84
PCNAP12004 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.58□□□□□ -1.84
PCNAP12004 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.58□□□□□ -1.84
PCNAP12004 KC877982.1-201ENST00000602313 470 ntBASIC3.58□□□□□ -1.84
PCNAP12004 AL021997.1-201ENST00000605757 193 ntBASIC3.58□□□□□ -1.84
PCNAP12004 AC109347.2-201ENST00000610220 349 ntBASIC3.58□□□□□ -1.84
PCNAP12004 AL603758.1-201ENST00000618654 241 ntBASIC3.58□□□□□ -1.84
PCNAP12004 AL161637.1-201ENST00000622380 412 ntBASIC3.58□□□□□ -1.84
PCNAP12004 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.58□□□□□ -1.84
PCNAP12004 LRRC77P-213ENST00000637727 880 ntBASIC3.58□□□□□ -1.84
PCNAP12004 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
PCNAP12004 MTND4P5-201ENST00000435821 1374 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms