Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AL590396.4-201ENST00000636779 956 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.92□□□□□ -2.1
COL4A2P08572 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL4A2P08572 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
COL4A2P08572 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
COL4A2P08572 RNA5SP295-201ENST00000362655 121 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 RNU6-251P-201ENST00000363235 104 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 Y_RNA.796-201ENST00000364268 102 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 Y_RNA.799-201ENST00000364992 102 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 HMGB1P12-201ENST00000438594 598 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.91□□□□□ -2.1
COL4A2P08572 HSFY3P-201ENST00000444242 1191 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.91□□□□□ -2.1
COL4A2P08572 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.91□□□□□ -2.1
COL4A2P08572 RPL21P104-201ENST00000464143 478 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 AC006483.1-201ENST00000487308 313 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 HMGB1P38-201ENST00000490557 577 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.91□□□□□ -2.1
COL4A2P08572 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.91□□□□□ -2.1
COL4A2P08572 AC006518.2-201ENST00000542513 940 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 DNAJC19P9-201ENST00000555084 351 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 MIR5089-201ENST00000580047 84 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
COL4A2P08572 AC006213.5-201ENST00000619673 288 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.91□□□□□ -2.1
COL4A2P08572 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.91□□□□□ -2.1
COL4A2P08572 SGO1P1-201ENST00000603525 1447 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 ZNF734P-201ENST00000419494 1534 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
COL4A2P08572 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
COL4A2P08572 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.91□□□□□ -2.1
COL4A2P08572 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL4A2P08572 Y_RNA.508-201ENST00000384502 114 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 RNU6-837P-201ENST00000391056 108 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 RNU6-932P-201ENST00000391108 106 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL4A2P08572 SSXP10-201ENST00000402595 565 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 AL512661.1-201ENST00000434586 1253 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 MOB1AP2-201ENST00000446060 614 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 RPS20P24-201ENST00000457473 361 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 AC008379.1-201ENST00000463655 464 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 AC079804.2-201ENST00000490376 200 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 AC112518.2-201ENST00000508565 425 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 COL6A4P2-205ENST00000509855 506 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.91□□□□□ -2.1
COL4A2P08572 RNA5SP182-201ENST00000516064 82 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 MTCYBP41-201ENST00000528913 1123 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.91□□□□□ -2.1
COL4A2P08572 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.91□□□□□ -2.1
COL4A2P08572 NIFKP8-201ENST00000560500 874 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 AP001029.3-201ENST00000588063 596 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 GAS5-AS1-201ENST00000602767 694 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 RPL23AP88-201ENST00000605759 454 ntBASIC1.91□□□□□ -2.1
COL4A2P08572 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.91□□□□□ -2.1
COL4A2P08572 MIR378A-201ENST00000362177 66 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 RNU6-50P-201ENST00000362356 103 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 RNU6-661P-201ENST00000362409 107 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 RNU6-263P-201ENST00000363811 107 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 RNA5SP138-201ENST00000365098 114 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 U6.112-201ENST00000384129 70 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 MIR649-201ENST00000384843 97 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
COL4A2P08572 AP002784.2-201ENST00000397300 549 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 MIR1287-201ENST00000408492 90 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 MIR1294-201ENST00000408503 142 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 RNU4-65P-201ENST00000410473 140 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 AL513331.1-201ENST00000411908 397 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 MTND1P23-201ENST00000416931 372 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 MTND2P16-201ENST00000419987 799 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.9□□□□□ -2.11
COL4A2P08572 WARS2P1-201ENST00000429678 537 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 AC109583.1-201ENST00000432156 268 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 RPL23AP16-201ENST00000441715 421 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 AC009237.8-201ENST00000445492 379 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 RPL23AP20-201ENST00000447965 421 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 snoU13.3-201ENST00000459441 104 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COL4A2P08572 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.9□□□□□ -2.11
COL4A2P08572 AC048346.1-201ENST00000510247 144 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 RNU6-1073P-201ENST00000517182 106 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.9□□□□□ -2.11
COL4A2P08572 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.9□□□□□ -2.11
COL4A2P08572 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.9□□□□□ -2.11
COL4A2P08572 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.9□□□□□ -2.11
COL4A2P08572 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.9□□□□□ -2.11
COL4A2P08572 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.9□□□□□ -2.11
COL4A2P08572 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.9□□□□□ -2.11
COL4A2P08572 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.9□□□□□ -2.11
COL4A2P08572 VIS1.1-201ENST00000610517 203 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.9□□□□□ -2.11
COL4A2P08572 AC005539.1-201ENST00000443768 1479 ntBASIC1.9□□□□□ -2.11
COL4A2P08572 RNU6-444P-201ENST00000383988 108 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL4A2P08572 AL121978.1-201ENST00000402778 359 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 AL450338.1-201ENST00000407987 512 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 AC092638.1-201ENST00000411966 1275 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 BX664727.1-201ENST00000416024 466 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.89□□□□□ -2.11
COL4A2P08572 AC234064.1-201ENST00000436312 247 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms