Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC073614.1-201ENST00000438690 650 ntBASIC3.77□□□□□ -1.81
MMP3P08254 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.77□□□□□ -1.81
MMP3P08254 RPL29P29-201ENST00000448725 423 ntBASIC3.77□□□□□ -1.81
MMP3P08254 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.77□□□□□ -1.81
MMP3P08254 AC104308.1-201ENST00000454621 333 ntBASIC3.77□□□□□ -1.81
MMP3P08254 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.77□□□□□ -1.81
MMP3P08254 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.77□□□□□ -1.81
MMP3P08254 AC021382.1-201ENST00000483523 359 ntBASIC3.77□□□□□ -1.81
MMP3P08254 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.77□□□□□ -1.81
MMP3P08254 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.77□□□□□ -1.81
MMP3P08254 AC110794.1-201ENST00000505816 425 ntBASIC3.77□□□□□ -1.81
MMP3P08254 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.77□□□□□ -1.81
MMP3P08254 AC023141.12-201ENST00000512399 199 ntBASIC3.77□□□□□ -1.81
MMP3P08254 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.77□□□□□ -1.81
MMP3P08254 RNA5SP309-201ENST00000516670 106 ntBASIC3.77□□□□□ -1.81
MMP3P08254 RN7SKP116-201ENST00000516902 319 ntBASIC3.77□□□□□ -1.81
MMP3P08254 RNU2-46P-201ENST00000517038 113 ntBASIC3.77□□□□□ -1.81
MMP3P08254 RN7SKP289-201ENST00000517244 295 ntBASIC3.77□□□□□ -1.81
MMP3P08254 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.77□□□□□ -1.81
MMP3P08254 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.77□□□□□ -1.81
MMP3P08254 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.77□□□□□ -1.81
MMP3P08254 AC087883.1-201ENST00000551882 391 ntBASIC3.77□□□□□ -1.81
MMP3P08254 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.77□□□□□ -1.81
MMP3P08254 AC060771.1-201ENST00000582031 164 ntBASIC3.77□□□□□ -1.81
MMP3P08254 MIR4325-201ENST00000583049 90 ntBASIC3.77□□□□□ -1.81
MMP3P08254 LLPHP1-201ENST00000603571 367 ntBASIC3.77□□□□□ -1.81
MMP3P08254 AC055876.5-201ENST00000605667 259 ntBASIC3.77□□□□□ -1.81
MMP3P08254 AL355472.4-201ENST00000610233 626 ntBASIC3.77□□□□□ -1.81
MMP3P08254 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
MMP3P08254 AC006065.5-201ENST00000623427 349 ntBASIC3.77□□□□□ -1.81
MMP3P08254 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.77□□□□□ -1.81
MMP3P08254 AC068137.3-201ENST00000639191 341 ntBASIC3.77□□□□□ -1.81
MMP3P08254 AC099654.12-201ENST00000639868 649 ntBASIC3.77□□□□□ -1.81
MMP3P08254 AC073869.6-201ENST00000640656 341 ntBASIC3.77□□□□□ -1.81
MMP3P08254 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
MMP3P08254 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
MMP3P08254 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
MMP3P08254 TNPO1P3-201ENST00000436471 2662 ntBASIC3.77□□□□□ -1.81
MMP3P08254 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.76□□□□□ -1.81
MMP3P08254 EXOC5P1-201ENST00000510543 1969 ntBASIC3.76□□□□□ -1.81
MMP3P08254 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
MMP3P08254 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
MMP3P08254 SNORD51-201ENST00000384320 80 ntBASIC3.76□□□□□ -1.81
MMP3P08254 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
MMP3P08254 RNU6-821P-201ENST00000390995 107 ntBASIC3.76□□□□□ -1.81
MMP3P08254 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.76□□□□□ -1.81
MMP3P08254 HMGN1P24-201ENST00000412282 298 ntBASIC3.76□□□□□ -1.81
MMP3P08254 Z99755.1-201ENST00000414048 380 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.76□□□□□ -1.81
MMP3P08254 AC092832.1-201ENST00000422934 400 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AC006028.1-201ENST00000438379 402 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AL671855.1-201ENST00000446875 1203 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.76□□□□□ -1.81
MMP3P08254 TMED11P-201ENST00000479478 690 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.76□□□□□ -1.81
MMP3P08254 PTGES3P3-201ENST00000511479 482 ntBASIC3.76□□□□□ -1.81
MMP3P08254 APOOP4-201ENST00000513530 597 ntBASIC3.76□□□□□ -1.81
MMP3P08254 MTND1P5-201ENST00000517906 940 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AC090136.1-201ENST00000520009 240 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.76□□□□□ -1.81
MMP3P08254 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.76□□□□□ -1.81
MMP3P08254 AP003497.1-201ENST00000528472 562 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AP003385.6-201ENST00000531603 374 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MMP3P08254 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.76□□□□□ -1.81
MMP3P08254 EEF1B2P4-201ENST00000551398 348 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.76□□□□□ -1.81
MMP3P08254 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.76□□□□□ -1.81
MMP3P08254 AC110741.2-201ENST00000605278 268 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AC009159.1-201ENST00000618386 642 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AC012150.2-201ENST00000621300 544 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AC095031.1-201ENST00000623685 672 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AC112204.3-201ENST00000623822 332 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AC068880.5-201ENST00000624331 290 ntBASIC3.76□□□□□ -1.81
MMP3P08254 OR5AK4P-201ENST00000635912 903 ntBASIC3.76□□□□□ -1.81
MMP3P08254 AC010149.2-201ENST00000637608 315 ntBASIC3.76□□□□□ -1.81
MMP3P08254 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MMP3P08254 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MMP3P08254 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.76□□□□□ -1.81
MMP3P08254 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.76□□□□□ -1.81
MMP3P08254 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
MMP3P08254 AL353743.1-202ENST00000431724 1695 ntBASIC3.75□□□□□ -1.81
MMP3P08254 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
MMP3P08254 MTND5P33-201ENST00000571250 1450 ntBASIC3.75□□□□□ -1.81
MMP3P08254 AC006504.1-201ENST00000562493 3666 ntBASIC3.75□□□□□ -1.81
MMP3P08254 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
MMP3P08254 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MMP3P08254 RNY4P24-201ENST00000362735 96 ntBASIC3.75□□□□□ -1.81
MMP3P08254 RNA5SP235-201ENST00000365411 114 ntBASIC3.75□□□□□ -1.81
MMP3P08254 RNU6-114P-201ENST00000384704 105 ntBASIC3.75□□□□□ -1.81
MMP3P08254 Y_RNA.582-201ENST00000391023 95 ntBASIC3.75□□□□□ -1.81
MMP3P08254 SNORD115.1-201ENST00000391109 76 ntBASIC3.75□□□□□ -1.81
MMP3P08254 U3.26-201ENST00000391236 204 ntBASIC3.75□□□□□ -1.81
MMP3P08254 MIR1250-201ENST00000408098 113 ntBASIC3.75□□□□□ -1.81
MMP3P08254 RNA5SP39-201ENST00000411245 120 ntBASIC3.75□□□□□ -1.81
MMP3P08254 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.75□□□□□ -1.81
MMP3P08254 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.75□□□□□ -1.81
MMP3P08254 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.75□□□□□ -1.81
MMP3P08254 OR2B8P-201ENST00000432841 938 ntBASIC3.75□□□□□ -1.81
MMP3P08254 AF228730.2-201ENST00000438784 848 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 346.6 ms