Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 7SK.7-201ENST00000603504 247 ntBASIC0.84□□□□□ -2.28
APOBP04114 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC0.84□□□□□ -2.28
APOBP04114 MIR203B-201ENST00000636080 86 ntBASIC0.84□□□□□ -2.28
APOBP04114 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC0.84□□□□□ -2.28
APOBP04114 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
APOBP04114 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.84□□□□□ -2.28
APOBP04114 RPL19P1-201ENST00000411635 428 ntBASIC0.84□□□□□ -2.28
APOBP04114 AL022400.1-201ENST00000423946 935 ntBASIC0.84□□□□□ -2.28
APOBP04114 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.84□□□□□ -2.28
APOBP04114 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC0.84□□□□□ -2.28
APOBP04114 RNU1-40P-201ENST00000516816 164 ntBASIC0.84□□□□□ -2.28
APOBP04114 RNU1-97P-201ENST00000516872 164 ntBASIC0.84□□□□□ -2.28
APOBP04114 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.84□□□□□ -2.28
APOBP04114 AC105245.1-201ENST00000581934 244 ntBASIC0.84□□□□□ -2.28
APOBP04114 AP000676.4-201ENST00000624659 623 ntBASIC0.84□□□□□ -2.28
APOBP04114 AC009452.1-201ENST00000640823 606 ntBASIC0.84□□□□□ -2.28
APOBP04114 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
APOBP04114 AC092832.1-201ENST00000422934 400 ntBASIC0.83□□□□□ -2.28
APOBP04114 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC0.83□□□□□ -2.28
APOBP04114 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC0.83□□□□□ -2.28
APOBP04114 AP000873.1-201ENST00000463987 400 ntBASIC0.83□□□□□ -2.28
APOBP04114 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC0.83□□□□□ -2.28
APOBP04114 RN7SKP265-201ENST00000516448 223 ntBASIC0.83□□□□□ -2.28
APOBP04114 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC0.83□□□□□ -2.28
APOBP04114 MIR3618-201ENST00000580330 88 ntBASIC0.83□□□□□ -2.28
APOBP04114 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
APOBP04114 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
APOBP04114 AC103710.2-202ENST00000641454 2853 ntBASIC0.83□□□□□ -2.28
APOBP04114 AP002345.1-201ENST00000456493 928 ntBASIC0.83□□□□□ -2.28
APOBP04114 RPL23AP41-201ENST00000484754 458 ntBASIC0.83□□□□□ -2.28
APOBP04114 OR8X1P-201ENST00000534542 869 ntBASIC0.83□□□□□ -2.28
APOBP04114 AC068135.2-201ENST00000569293 1028 ntBASIC0.83□□□□□ -2.28
APOBP04114 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
APOBP04114 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC0.83□□□□□ -2.28
APOBP04114 RNU1-133P-201ENST00000364867 167 ntBASIC0.83□□□□□ -2.28
APOBP04114 RNA5SP489-201ENST00000410986 109 ntBASIC0.83□□□□□ -2.28
APOBP04114 Z75741.2-201ENST00000417272 1167 ntBASIC0.83□□□□□ -2.28
APOBP04114 SNORD121B-201ENST00000458838 81 ntBASIC0.83□□□□□ -2.28
APOBP04114 AC021087.2-201ENST00000504656 1203 ntBASIC0.83□□□□□ -2.28
APOBP04114 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.83□□□□□ -2.28
APOBP04114 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC0.83□□□□□ -2.28
APOBP04114 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.83□□□□□ -2.28
APOBP04114 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC0.83□□□□□ -2.28
APOBP04114 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
APOBP04114 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
APOBP04114 HSPE1P11-201ENST00000339579 310 ntBASIC0.82□□□□□ -2.28
APOBP04114 U3.15-201ENST00000365398 212 ntBASIC0.82□□□□□ -2.28
APOBP04114 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC0.82□□□□□ -2.28
APOBP04114 AC008837.2-201ENST00000513076 418 ntBASIC0.82□□□□□ -2.28
APOBP04114 RNA5SP384-201ENST00000516615 116 ntBASIC0.82□□□□□ -2.28
APOBP04114 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.82□□□□□ -2.28
APOBP04114 AP004242.1-201ENST00000533701 349 ntBASIC0.82□□□□□ -2.28
APOBP04114 TRAV28-201ENST00000557548 323 ntBASIC0.82□□□□□ -2.28
APOBP04114 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.82□□□□□ -2.28
APOBP04114 AC090970.3-201ENST00000612566 866 ntBASIC0.82□□□□□ -2.28
APOBP04114 RNU4-91P-201ENST00000364778 135 ntBASIC0.82□□□□□ -2.28
APOBP04114 RNU6-516P-201ENST00000411381 104 ntBASIC0.82□□□□□ -2.28
APOBP04114 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC0.82□□□□□ -2.28
APOBP04114 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.82□□□□□ -2.28
APOBP04114 SETP8-201ENST00000435341 628 ntBASIC0.82□□□□□ -2.28
APOBP04114 VTA1P2-201ENST00000520205 911 ntBASIC0.82□□□□□ -2.28
APOBP04114 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.82□□□□□ -2.28
APOBP04114 AL031274.2-201ENST00000599419 203 ntBASIC0.82□□□□□ -2.28
APOBP04114 AC006329.2-201ENST00000611491 394 ntBASIC0.82□□□□□ -2.28
APOBP04114 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.82□□□□□ -2.28
APOBP04114 AC111188.2-201ENST00000529697 1387 ntBASIC0.82□□□□□ -2.28
APOBP04114 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC0.82□□□□□ -2.28
APOBP04114 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.82□□□□□ -2.28
APOBP04114 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.82□□□□□ -2.28
APOBP04114 XKRYP6-201ENST00000440468 1116 ntBASIC0.82□□□□□ -2.28
APOBP04114 XKRYP3-201ENST00000442113 1116 ntBASIC0.82□□□□□ -2.28
APOBP04114 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.82□□□□□ -2.28
APOBP04114 AC090821.2-201ENST00000523552 176 ntBASIC0.82□□□□□ -2.28
APOBP04114 AC007375.1-201ENST00000554513 578 ntBASIC0.82□□□□□ -2.28
APOBP04114 OR4K8P-201ENST00000578842 1048 ntBASIC0.82□□□□□ -2.28
APOBP04114 AC083899.3-201ENST00000603413 594 ntBASIC0.82□□□□□ -2.28
APOBP04114 AL121917.1-203ENST00000605534 577 ntBASIC0.82□□□□□ -2.28
APOBP04114 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.82□□□□□ -2.28
APOBP04114 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
APOBP04114 MIR222-201ENST00000384992 110 ntBASIC0.82□□□□□ -2.28
APOBP04114 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC0.82□□□□□ -2.28
APOBP04114 RGS5-217ENST00000451759 835 ntTSL 3 BASIC0.82□□□□□ -2.28
APOBP04114 RFC5P1-201ENST00000454419 874 ntBASIC0.82□□□□□ -2.28
APOBP04114 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.82□□□□□ -2.28
APOBP04114 CBX3P8-201ENST00000532412 525 ntBASIC0.82□□□□□ -2.28
APOBP04114 ACTR3BP3-201ENST00000565577 979 ntBASIC0.82□□□□□ -2.28
APOBP04114 AL159169.2-201ENST00000610061 1269 ntBASIC0.82□□□□□ -2.28
APOBP04114 AL590099.1-201ENST00000615276 138 ntBASIC0.82□□□□□ -2.28
APOBP04114 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC0.82□□□□□ -2.28
APOBP04114 MTND4P1-201ENST00000457501 1466 ntBASIC0.81□□□□□ -2.28
APOBP04114 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.81□□□□□ -2.28
APOBP04114 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
APOBP04114 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.81□□□□□ -2.28
APOBP04114 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC0.81□□□□□ -2.28
APOBP04114 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.81□□□□□ -2.28
APOBP04114 AL096701.2-201ENST00000416920 238 ntBASIC0.81□□□□□ -2.28
APOBP04114 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
APOBP04114 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
APOBP04114 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
APOBP04114 RNU6-492P-201ENST00000363035 104 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms