Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU6-501P-201ENST00000364072 100 ntBASIC3.29□□□□□ -1.88
VTNP04004 RNU6-343P-201ENST00000364709 104 ntBASIC3.29□□□□□ -1.88
VTNP04004 SNORD116-9-201ENST00000384000 95 ntBASIC3.29□□□□□ -1.88
VTNP04004 SNORD116-3-201ENST00000384287 95 ntBASIC3.29□□□□□ -1.88
VTNP04004 SNORD116-7-201ENST00000384404 95 ntBASIC3.29□□□□□ -1.88
VTNP04004 SNORD116-5-201ENST00000384462 95 ntBASIC3.29□□□□□ -1.88
VTNP04004 AC092447.6-201ENST00000414578 210 ntBASIC3.29□□□□□ -1.88
VTNP04004 RAD23BP2-201ENST00000416003 1207 ntBASIC3.29□□□□□ -1.88
VTNP04004 SEPT2P1-201ENST00000419651 180 ntBASIC3.29□□□□□ -1.88
VTNP04004 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.29□□□□□ -1.88
VTNP04004 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.29□□□□□ -1.88
VTNP04004 AC098826.1-201ENST00000433943 471 ntBASIC3.29□□□□□ -1.88
VTNP04004 AC129850.1-201ENST00000436203 508 ntBASIC3.29□□□□□ -1.88
VTNP04004 SETP5-201ENST00000437270 562 ntBASIC3.29□□□□□ -1.88
VTNP04004 MUPP-201ENST00000438111 566 ntBASIC3.29□□□□□ -1.88
VTNP04004 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.29□□□□□ -1.88
VTNP04004 EPS15P1-201ENST00000448836 336 ntBASIC3.29□□□□□ -1.88
VTNP04004 HMGN2P7-201ENST00000456186 273 ntBASIC3.29□□□□□ -1.88
VTNP04004 VN1R17P-201ENST00000472048 1090 ntBASIC3.29□□□□□ -1.88
VTNP04004 ST13P14-201ENST00000474095 734 ntBASIC3.29□□□□□ -1.88
VTNP04004 AC104563.1-201ENST00000476147 376 ntBASIC3.29□□□□□ -1.88
VTNP04004 AL024509.2-201ENST00000493462 493 ntBASIC3.29□□□□□ -1.88
VTNP04004 AC106872.3-201ENST00000495104 446 ntBASIC3.29□□□□□ -1.88
VTNP04004 COX7A2P2-201ENST00000505291 250 ntBASIC3.29□□□□□ -1.88
VTNP04004 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
VTNP04004 POU5F1P7-201ENST00000508759 541 ntBASIC3.29□□□□□ -1.88
VTNP04004 AC093809.1-201ENST00000509155 340 ntBASIC3.29□□□□□ -1.88
VTNP04004 AC091965.2-201ENST00000512324 613 ntBASIC3.29□□□□□ -1.88
VTNP04004 AC116347.2-201ENST00000514912 523 ntBASIC3.29□□□□□ -1.88
VTNP04004 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.29□□□□□ -1.88
VTNP04004 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.29□□□□□ -1.88
VTNP04004 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VTNP04004 AP004247.1-201ENST00000531556 1289 ntBASIC3.29□□□□□ -1.88
VTNP04004 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.29□□□□□ -1.88
VTNP04004 EEF1B2P4-201ENST00000551398 348 ntBASIC3.29□□□□□ -1.88
VTNP04004 PCMTD1P2-201ENST00000565017 355 ntBASIC3.29□□□□□ -1.88
VTNP04004 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.29□□□□□ -1.88
VTNP04004 MIR544B-201ENST00000582372 78 ntBASIC3.29□□□□□ -1.88
VTNP04004 AC006504.3-201ENST00000586818 523 ntBASIC3.29□□□□□ -1.88
VTNP04004 AL357080.1-201ENST00000617394 239 ntBASIC3.29□□□□□ -1.88
VTNP04004 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.29□□□□□ -1.88
VTNP04004 AL445264.1-201ENST00000621719 171 ntBASIC3.29□□□□□ -1.88
VTNP04004 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VTNP04004 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VTNP04004 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
VTNP04004 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.28□□□□□ -1.88
VTNP04004 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.28□□□□□ -1.88
VTNP04004 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.28□□□□□ -1.88
VTNP04004 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VTNP04004 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.28□□□□□ -1.88
VTNP04004 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
VTNP04004 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.28□□□□□ -1.88
VTNP04004 RNU6-712P-201ENST00000410558 100 ntBASIC3.28□□□□□ -1.88
VTNP04004 RPL32P35-201ENST00000415214 394 ntBASIC3.28□□□□□ -1.88
VTNP04004 AC016907.1-201ENST00000419483 435 ntBASIC3.28□□□□□ -1.88
VTNP04004 Z99497.1-201ENST00000421282 135 ntBASIC3.28□□□□□ -1.88
VTNP04004 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.28□□□□□ -1.88
VTNP04004 AL365184.2-201ENST00000431139 435 ntBASIC3.28□□□□□ -1.88
VTNP04004 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.28□□□□□ -1.88
VTNP04004 AL135938.1-201ENST00000443141 297 ntBASIC3.28□□□□□ -1.88
VTNP04004 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.28□□□□□ -1.88
VTNP04004 AP000936.2-201ENST00000447151 681 ntBASIC3.28□□□□□ -1.88
VTNP04004 RPL31P3-201ENST00000458430 332 ntBASIC3.28□□□□□ -1.88
VTNP04004 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.28□□□□□ -1.88
VTNP04004 AC093677.1-201ENST00000514414 678 ntBASIC3.28□□□□□ -1.88
VTNP04004 SCGB1D5P-201ENST00000515134 247 ntBASIC3.28□□□□□ -1.88
VTNP04004 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.28□□□□□ -1.88
VTNP04004 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.28□□□□□ -1.88
VTNP04004 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.28□□□□□ -1.88
VTNP04004 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VTNP04004 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.28□□□□□ -1.88
VTNP04004 AC087481.2-201ENST00000565492 330 ntBASIC3.28□□□□□ -1.88
VTNP04004 ZNF192P1-203ENST00000565888 810 ntBASIC3.28□□□□□ -1.88
VTNP04004 MIR3186-201ENST00000577404 85 ntBASIC3.28□□□□□ -1.88
VTNP04004 AC090615.1-201ENST00000577519 154 ntBASIC3.28□□□□□ -1.88
VTNP04004 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.28□□□□□ -1.88
VTNP04004 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.28□□□□□ -1.88
VTNP04004 AC012669.1-201ENST00000603209 283 ntBASIC3.28□□□□□ -1.88
VTNP04004 AL022161.1-201ENST00000604390 213 ntBASIC3.28□□□□□ -1.88
VTNP04004 AC092354.1-201ENST00000606057 376 ntBASIC3.28□□□□□ -1.88
VTNP04004 MIR7844-201ENST00000616161 122 ntBASIC3.28□□□□□ -1.88
VTNP04004 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VTNP04004 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VTNP04004 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.28□□□□□ -1.88
VTNP04004 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
VTNP04004 EXOC5P1-201ENST00000510543 1969 ntBASIC3.27□□□□□ -1.89
VTNP04004 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.27□□□□□ -1.89
VTNP04004 AL672296.1-201ENST00000427780 2158 ntBASIC3.27□□□□□ -1.89
VTNP04004 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VTNP04004 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VTNP04004 AL672167.1-206ENST00000356293 943 ntBASIC3.27□□□□□ -1.89
VTNP04004 SNORD56.3-201ENST00000363507 71 ntBASIC3.27□□□□□ -1.89
VTNP04004 RNU6-853P-201ENST00000364306 107 ntBASIC3.27□□□□□ -1.89
VTNP04004 RNU6-744P-201ENST00000365557 107 ntBASIC3.27□□□□□ -1.89
VTNP04004 RNU6-1316P-201ENST00000384242 108 ntBASIC3.27□□□□□ -1.89
VTNP04004 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.27□□□□□ -1.89
VTNP04004 RNU2-71P-201ENST00000411395 189 ntBASIC3.27□□□□□ -1.89
VTNP04004 MTCO1P17-201ENST00000411522 491 ntBASIC3.27□□□□□ -1.89
VTNP04004 MTCO2P16-201ENST00000436962 677 ntBASIC3.27□□□□□ -1.89
VTNP04004 COX6CP12-201ENST00000446748 202 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms