Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC091805.2-201ENST00000603848 235 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 AL136363.2-201ENST00000604173 851 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 AC004853.1-201ENST00000604902 698 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 AC005344.1-201ENST00000613391 459 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 AL596245.1-201ENST00000618994 362 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLPTM1O96005 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CLPTM1O96005 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLPTM1O96005 AP004289.2-201ENST00000444413 1457 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLPTM1O96005 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLPTM1O96005 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLPTM1O96005 AC092125.1-201ENST00000562568 1995 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLPTM1O96005 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLPTM1O96005 Y_RNA.3-201ENST00000362331 103 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 Y_RNA.46-201ENST00000362695 102 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 RNA5SP258-201ENST00000362750 119 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CLPTM1O96005 RPS3AP36-201ENST00000398190 775 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 RNA5SP129-201ENST00000410276 118 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 Y_RNA.599-201ENST00000410489 109 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 Y_RNA.608-201ENST00000410647 95 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 Y_RNA.619-201ENST00000410951 90 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.26□□□□□ -1.89
CLPTM1O96005 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.26□□□□□ -1.89
CLPTM1O96005 AC245052.5-201ENST00000416320 649 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.26□□□□□ -1.89
CLPTM1O96005 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.26□□□□□ -1.89
CLPTM1O96005 RPL22P17-201ENST00000438729 315 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.26□□□□□ -1.89
CLPTM1O96005 Z95327.1-201ENST00000446082 482 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AL353691.1-201ENST00000451332 387 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 SNRPFP4-201ENST00000456366 242 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 ACTR3P3-201ENST00000480448 893 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AC093278.1-201ENST00000494700 600 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AC093663.1-201ENST00000497190 394 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.26□□□□□ -1.89
CLPTM1O96005 AC112204.1-201ENST00000502591 103 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AC096751.1-202ENST00000502691 1067 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 COX7A2P2-201ENST00000505291 250 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.26□□□□□ -1.89
CLPTM1O96005 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.26□□□□□ -1.89
CLPTM1O96005 NDUFB4P2-201ENST00000509515 391 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AC109464.2-201ENST00000510242 943 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 CDC42P4-201ENST00000510507 563 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 RN7SKP13-201ENST00000515933 244 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 RNU6-720P-201ENST00000516363 108 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 RN7SKP116-201ENST00000516902 319 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AC022878.1-201ENST00000530684 149 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AP003385.6-201ENST00000531603 374 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AC109635.4-202ENST00000531666 412 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CLPTM1O96005 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.26□□□□□ -1.89
CLPTM1O96005 AC107954.1-201ENST00000565906 727 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 MIR3913-1-201ENST00000577744 102 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.26□□□□□ -1.89
CLPTM1O96005 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.26□□□□□ -1.89
CLPTM1O96005 MIR4506-201ENST00000584693 77 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AC009977.1-201ENST00000586015 570 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.26□□□□□ -1.89
CLPTM1O96005 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.26□□□□□ -1.89
CLPTM1O96005 AC006077.1-201ENST00000604746 343 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 IGHV3-29-201ENST00000604817 344 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AL021997.1-201ENST00000605757 193 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.26□□□□□ -1.89
CLPTM1O96005 AC138749.5-201ENST00000611461 208 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AC116165.2-201ENST00000616705 206 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.26□□□□□ -1.89
CLPTM1O96005 AC099654.13-201ENST00000639774 207 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 AL356274.2-201ENST00000624379 3752 ntBASIC3.26□□□□□ -1.89
CLPTM1O96005 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.26□□□□□ -1.89
CLPTM1O96005 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CLPTM1O96005 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLPTM1O96005 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CLPTM1O96005 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
CLPTM1O96005 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLPTM1O96005 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLPTM1O96005 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.25□□□□□ -1.89
CLPTM1O96005 RNU6-97P-201ENST00000363387 104 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.25□□□□□ -1.89
CLPTM1O96005 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CLPTM1O96005 SNORD51-201ENST00000384320 80 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 MIR554-201ENST00000384874 96 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 RNU6-821P-201ENST00000390995 107 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 CCNG1P1-201ENST00000406783 885 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 RPS3AP3-201ENST00000411933 242 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AF274854.1-201ENST00000413236 615 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AC092447.6-201ENST00000414578 210 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.25□□□□□ -1.89
CLPTM1O96005 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.25□□□□□ -1.89
CLPTM1O96005 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.25□□□□□ -1.89
CLPTM1O96005 AL591419.1-201ENST00000427423 339 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.25□□□□□ -1.89
CLPTM1O96005 OR2B8P-201ENST00000432841 938 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AC244505.4-201ENST00000434905 287 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 SSXP5-201ENST00000443473 287 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AL033528.1-201ENST00000453780 140 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 MTND2P33-201ENST00000506452 1031 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms