Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL357080.1-201ENST00000617394 239 ntBASIC2.68□□□□□ -1.98
CLDN9O95484 AL049777.1-201ENST00000622740 518 ntBASIC2.68□□□□□ -1.98
CLDN9O95484 AC079597.1-201ENST00000624306 508 ntBASIC2.68□□□□□ -1.98
CLDN9O95484 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.68□□□□□ -1.98
CLDN9O95484 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLDN9O95484 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CLDN9O95484 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLDN9O95484 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN9O95484 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.67□□□□□ -1.98
CLDN9O95484 RNU5E-10P-201ENST00000363506 118 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 RNU6-198P-201ENST00000384258 104 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 MIR514A1-201ENST00000385133 98 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.67□□□□□ -1.98
CLDN9O95484 PPP1R11P2-201ENST00000423543 382 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 BX119904.4-201ENST00000424402 301 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 NANOGP2-201ENST00000435391 727 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN9O95484 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.67□□□□□ -1.98
CLDN9O95484 AL358794.1-201ENST00000445689 381 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN9O95484 snoU13.28-201ENST00000459235 104 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 RPL31P50-201ENST00000471002 296 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 RPL21P131-201ENST00000497298 483 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN9O95484 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.67□□□□□ -1.98
CLDN9O95484 RNU6-928P-201ENST00000516876 104 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.67□□□□□ -1.98
CLDN9O95484 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN9O95484 AC023043.3-201ENST00000593113 385 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 BNIP3P26-201ENST00000600827 554 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 AC069431.2-201ENST00000604149 1099 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 AF129408.1-201ENST00000608767 431 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
CLDN9O95484 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CLDN9O95484 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.67□□□□□ -1.98
CLDN9O95484 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.67□□□□□ -1.98
CLDN9O95484 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN9O95484 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLDN9O95484 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLDN9O95484 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CLDN9O95484 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CLDN9O95484 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CLDN9O95484 RPL23AP29-201ENST00000397284 453 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 UBA52P6-201ENST00000399822 382 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN9O95484 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN9O95484 AL645937.1-202ENST00000421799 937 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 AC018630.2-202ENST00000422992 927 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 NDUFB4P7-201ENST00000423198 363 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.66□□□□□ -1.98
CLDN9O95484 RPL7L1P10-201ENST00000427790 463 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 SAR1AP4-201ENST00000429225 591 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 AL139132.1-201ENST00000431587 344 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 RSL24D1P3-201ENST00000449255 495 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 MTND1P16-201ENST00000465177 898 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.66□□□□□ -1.98
CLDN9O95484 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.66□□□□□ -1.98
CLDN9O95484 EIF4BP1-201ENST00000554881 351 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 HMGB1P14-201ENST00000557424 591 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 CYCSP2-201ENST00000558168 301 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN9O95484 DUXAP4-201ENST00000603046 613 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 AC004987.4-201ENST00000603383 338 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 AL133507.1-201ENST00000605269 557 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 AL161629.2-201ENST00000615347 275 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 CR381653.2-201ENST00000624041 768 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.66□□□□□ -1.98
CLDN9O95484 AC110079.1-202ENST00000635213 138 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 AC092447.7-201ENST00000422212 1621 ntBASIC2.66□□□□□ -1.98
CLDN9O95484 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLDN9O95484 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLDN9O95484 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CLDN9O95484 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.65□□□□□ -1.98
CLDN9O95484 AL390862.1-201ENST00000635467 1469 ntBASIC2.65□□□□□ -1.98
CLDN9O95484 FAM35BP-202ENST00000497389 3337 ntBASIC2.65□□□□□ -1.98
CLDN9O95484 AP000526.1-201ENST00000603308 1388 ntBASIC2.65□□□□□ -1.98
CLDN9O95484 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN9O95484 RNU6-97P-201ENST00000363387 104 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 RNU6-560P-201ENST00000364007 108 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 SNORA36C-201ENST00000384289 132 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN9O95484 COTL1P1-201ENST00000422309 375 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 USP9YP11-201ENST00000427537 717 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 AC109583.1-201ENST00000432156 268 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 AL512844.2-201ENST00000433990 593 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.65□□□□□ -1.99
CLDN9O95484 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN9O95484 AC007327.1-201ENST00000447461 264 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 GSTA11P-201ENST00000452866 669 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN9O95484 RNU6-420P-201ENST00000458780 107 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 RPL30P9-201ENST00000465586 330 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 AL135752.1-201ENST00000479477 471 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 RN7SL297P-201ENST00000483161 293 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 RPS3AP14-201ENST00000483907 780 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN9O95484 RNA5SP76-201ENST00000516277 87 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 RNU6-56P-201ENST00000516986 93 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 SNORA31.21-201ENST00000517180 77 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 DEFB131D-201ENST00000526803 184 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms