Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MIR4716-201ENST00000579628 84 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 AC020910.2-201ENST00000603635 610 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 AC007038.2-201ENST00000608095 740 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 AC103710.3-201ENST00000608157 948 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.36□□□□□ -1.71
CDKL5O76039 AC006504.8-201ENST00000621046 635 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 YWHAEP7-203ENST00000622054 312 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDKL5O76039 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDKL5O76039 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDKL5O76039 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDKL5O76039 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CDKL5O76039 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDKL5O76039 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDKL5O76039 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CDKL5O76039 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL5O76039 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL5O76039 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.35□□□□□ -1.71
CDKL5O76039 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL5O76039 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL5O76039 RNU6-456P-201ENST00000384493 107 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 RNU6-878P-201ENST00000384578 110 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 RPS4XP8-201ENST00000402039 771 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 OR9R1P-201ENST00000412200 877 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 MTCO2P5-201ENST00000422621 426 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 AC007283.2-201ENST00000424739 197 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 AC092017.2-201ENST00000427600 362 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.35□□□□□ -1.71
CDKL5O76039 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.35□□□□□ -1.71
CDKL5O76039 USP9YP15-201ENST00000442391 422 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.35□□□□□ -1.71
CDKL5O76039 AL136380.1-201ENST00000447970 162 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.35□□□□□ -1.71
CDKL5O76039 AC104073.1-201ENST00000451988 151 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.35□□□□□ -1.71
CDKL5O76039 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.35□□□□□ -1.71
CDKL5O76039 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.35□□□□□ -1.71
CDKL5O76039 RNU6-1153P-201ENST00000516760 105 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 RNU6-1220P-201ENST00000517126 108 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.35□□□□□ -1.71
CDKL5O76039 AC107934.1-201ENST00000522215 217 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.35□□□□□ -1.71
CDKL5O76039 AC087499.8-201ENST00000578406 226 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 AL136363.1-201ENST00000605349 337 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 AC121334.2-201ENST00000605387 271 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.35□□□□□ -1.71
CDKL5O76039 AL355472.4-201ENST00000610233 626 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 AC093648.1-201ENST00000623546 606 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 CYP3A51P-201ENST00000633513 256 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 CEP170P1-201ENST00000502249 4587 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL5O76039 AC092447.10-201ENST00000620607 1652 ntBASIC4.35□□□□□ -1.71
CDKL5O76039 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.35□□□□□ -1.71
CDKL5O76039 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CDKL5O76039 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL5O76039 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.34□□□□□ -1.71
CDKL5O76039 AC130650.2-201ENST00000618736 2403 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 RNU6-116P-201ENST00000384042 109 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 RNU6-1226P-201ENST00000384317 107 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 MIR30B-201ENST00000384850 88 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.34□□□□□ -1.71
CDKL5O76039 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.34□□□□□ -1.71
CDKL5O76039 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.34□□□□□ -1.71
CDKL5O76039 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.34□□□□□ -1.71
CDKL5O76039 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.34□□□□□ -1.71
CDKL5O76039 RPS15AP9-201ENST00000439856 381 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 AL049734.2-201ENST00000441066 616 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.34□□□□□ -1.71
CDKL5O76039 AL136097.1-201ENST00000456945 913 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 RPS20P20-201ENST00000460498 340 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 RPS20P21-201ENST00000466859 343 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 AC083798.1-201ENST00000472671 131 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.34□□□□□ -1.71
CDKL5O76039 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.34□□□□□ -1.71
CDKL5O76039 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CDKL5O76039 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.34□□□□□ -1.71
CDKL5O76039 RNU6-835P-201ENST00000516974 104 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.34□□□□□ -1.71
CDKL5O76039 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.34□□□□□ -1.71
CDKL5O76039 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.34□□□□□ -1.71
CDKL5O76039 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.34□□□□□ -1.71
CDKL5O76039 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.34□□□□□ -1.71
CDKL5O76039 RN7SL703P-201ENST00000578485 302 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 AC025449.1-201ENST00000603896 529 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDKL5O76039 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.34□□□□□ -1.71
CDKL5O76039 AC244205.2-202ENST00000635781 342 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 ZNF680P1-201ENST00000436625 1469 ntBASIC4.34□□□□□ -1.71
CDKL5O76039 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDKL5O76039 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDKL5O76039 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDKL5O76039 AL161781.1-201ENST00000354277 403 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 RNU6-28P-201ENST00000362378 107 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 Y_RNA.142-201ENST00000363491 102 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 RNU6-359P-201ENST00000365466 108 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 SNORA20.2-201ENST00000383922 131 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 RNU6-328P-201ENST00000390887 106 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 AL356421.1-201ENST00000403255 413 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.33□□□□□ -1.72
CDKL5O76039 RPL31P45-201ENST00000419532 356 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms