Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF40AO75400 VN1R17P-201ENST00000472048 1090 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF40AO75400 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.3□□□□□ -1.56
PRPF40AO75400 RN7SKP60-201ENST00000516985 239 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 AF186190.1-201ENST00000517470 480 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 ERHP1-201ENST00000523006 310 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF40AO75400 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF40AO75400 HMGB3P26-201ENST00000560051 582 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.3□□□□□ -1.56
PRPF40AO75400 POLR3GP2-201ENST00000588366 668 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 BNIP3P22-201ENST00000593399 556 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF40AO75400 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF40AO75400 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF40AO75400 AC103705.1-201ENST00000619013 241 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.3□□□□□ -1.56
PRPF40AO75400 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PRPF40AO75400 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF40AO75400 AC090337.1-201ENST00000579651 2074 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PRPF40AO75400 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF40AO75400 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF40AO75400 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF40AO75400 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40AO75400 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.29□□□□□ -1.56
PRPF40AO75400 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF40AO75400 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40AO75400 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40AO75400 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PRPF40AO75400 RN7SKP115-201ENST00000363177 317 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 Y_RNA.326-201ENST00000365176 113 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 RNA5SP22-201ENST00000365393 109 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 SNORD70.1-201ENST00000391007 85 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 RPL37P18-201ENST00000411602 243 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 AL160275.2-201ENST00000412010 394 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 AL139095.3-201ENST00000419672 1203 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.29□□□□□ -1.56
PRPF40AO75400 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40AO75400 BRK1P2-201ENST00000442875 223 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 AL359073.1-201ENST00000448036 403 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40AO75400 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40AO75400 RPL21P93-201ENST00000480465 489 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.29□□□□□ -1.56
PRPF40AO75400 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40AO75400 RNU6-256P-201ENST00000516747 97 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.29□□□□□ -1.56
PRPF40AO75400 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40AO75400 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.29□□□□□ -1.56
PRPF40AO75400 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.29□□□□□ -1.56
PRPF40AO75400 AC022432.1-201ENST00000595739 310 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF40AO75400 DPPA3P3-201ENST00000603842 430 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 AC104662.1-201ENST00000604448 511 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 AC245389.1-201ENST00000605141 529 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 AL353748.2-201ENST00000622148 471 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 ZFRP1-201ENST00000457579 2970 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PRPF40AO75400 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
PRPF40AO75400 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40AO75400 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40AO75400 AL365440.1-201ENST00000436135 2167 ntBASIC5.29□□□□□ -1.56
PRPF40AO75400 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40AO75400 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF40AO75400 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PRPF40AO75400 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40AO75400 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PRPF40AO75400 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.28□□□□□ -1.56
PRPF40AO75400 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF40AO75400 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF40AO75400 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PRPF40AO75400 BX682237.1-201ENST00000415016 335 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 BTF3L4P3-201ENST00000418879 476 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 HMGB1P27-201ENST00000431429 603 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 GTF2IP13-201ENST00000438487 386 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 MTCYBP6-201ENST00000441810 138 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF40AO75400 MTND4P19-201ENST00000446659 478 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.28□□□□□ -1.56
PRPF40AO75400 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF40AO75400 RNU6-566P-201ENST00000516790 107 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 RNU6-1088P-201ENST00000516850 104 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 RN7SKP258-201ENST00000517151 304 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 SNORA31.22-201ENST00000517204 135 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 CDH12P4-201ENST00000517835 295 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 CDH12P3-201ENST00000517935 295 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 CDH12P1-201ENST00000518435 295 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF40AO75400 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF40AO75400 AC135001.1-201ENST00000544546 283 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 AC093249.1-201ENST00000567049 203 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 MTCO3P13-201ENST00000577757 781 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 MIR4790-201ENST00000577799 79 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.28□□□□□ -1.56
PRPF40AO75400 AC020910.2-201ENST00000603635 610 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 AC010201.1-201ENST00000605051 540 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms