Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 OR51A5P-201ENST00000415429 942 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS4BO75351 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS4BO75351 MTND4LP16-201ENST00000440828 295 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS4BO75351 RPS3AP50-201ENST00000487064 803 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 RPL39P36-201ENST00000490784 156 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 AL132838.2-201ENST00000492041 314 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 AL592156.1-201ENST00000508758 304 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS4BO75351 RNA5SP73-201ENST00000516744 108 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 RNU6-64P-201ENST00000517119 105 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS4BO75351 AC128657.1-201ENST00000549459 145 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS4BO75351 MIR4444-1-201ENST00000581696 74 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 MIR4444-2-201ENST00000584390 74 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS4BO75351 AC112230.1-201ENST00000604342 547 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 IGHV3-29-201ENST00000604817 344 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 TUG1_1.1-201ENST00000610654 145 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS4BO75351 U73479.1-201ENST00000618062 168 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 AC006504.8-201ENST00000621046 635 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 AC024940.5-201ENST00000622889 474 ntBASIC4.09□□□□□ -1.75
VPS4BO75351 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
VPS4BO75351 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.09□□□□□ -1.76
VPS4BO75351 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.09□□□□□ -1.76
VPS4BO75351 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VPS4BO75351 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS4BO75351 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS4BO75351 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS4BO75351 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS4BO75351 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS4BO75351 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS4BO75351 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS4BO75351 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS4BO75351 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS4BO75351 RNU6-1249P-201ENST00000363237 111 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 RNA5SP513-201ENST00000364648 118 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 RNA5SP283-201ENST00000365604 119 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS4BO75351 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.08□□□□□ -1.76
VPS4BO75351 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
VPS4BO75351 MIR135A2-201ENST00000384854 100 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.08□□□□□ -1.76
VPS4BO75351 RNU6-712P-201ENST00000410558 100 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS4BO75351 RPS12P23-201ENST00000419579 400 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 MTND5P3-201ENST00000438536 1800 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS4BO75351 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS4BO75351 CACYBPP2-201ENST00000453625 678 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 snoU13.24-201ENST00000458998 104 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 AC126389.1-201ENST00000477436 290 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 AC018710.1-201ENST00000506509 158 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 AC105417.1-201ENST00000514691 285 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS4BO75351 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS4BO75351 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS4BO75351 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS4BO75351 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.08□□□□□ -1.76
VPS4BO75351 HIF1AP1-201ENST00000553642 175 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 AC007424.1-203ENST00000554613 687 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS4BO75351 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS4BO75351 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS4BO75351 AC113403.1-201ENST00000604910 193 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 AC008945.2-201ENST00000606056 604 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 AC128687.2-201ENST00000609657 566 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 DISC2.1-201ENST00000612827 205 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 AC104260.1-201ENST00000616660 539 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS4BO75351 RMST_9.1-201ENST00000619945 193 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 AC006065.5-201ENST00000623427 349 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS4BO75351 AC140479.6-201ENST00000633535 357 ntBASIC4.08□□□□□ -1.76
VPS4BO75351 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VPS4BO75351 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
VPS4BO75351 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS4BO75351 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VPS4BO75351 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
VPS4BO75351 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS4BO75351 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS4BO75351 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS4BO75351 AC008725.1-201ENST00000605123 2263 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
VPS4BO75351 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS4BO75351 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
VPS4BO75351 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS4BO75351 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS4BO75351 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS4BO75351 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS4BO75351 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 MTCO1P9-201ENST00000505577 1534 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS4BO75351 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS4BO75351 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS4BO75351 RPL7P26-201ENST00000333817 754 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms