Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC095057.3-201ENST00000567102 1157 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.73□□□□□ -1.97
NPHP4O75161 AL133393.1-201ENST00000603277 287 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 AC113368.1-201ENST00000603736 382 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 AC012467.1-201ENST00000607740 256 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
NPHP4O75161 AL589994.2-201ENST00000621124 579 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.73□□□□□ -1.97
NPHP4O75161 AL163152.1-201ENST00000642001 374 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.73□□□□□ -1.97
NPHP4O75161 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.73□□□□□ -1.97
NPHP4O75161 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.73□□□□□ -1.97
NPHP4O75161 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NPHP4O75161 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NPHP4O75161 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NPHP4O75161 AC025263.3-201ENST00000622965 1396 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 SNORD56.4-201ENST00000363883 71 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 RNU6-444P-201ENST00000383988 108 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 RNU6-481P-201ENST00000384194 107 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 RNU1-57P-201ENST00000384491 166 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 AL121972.1-201ENST00000402023 252 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 UBE2V1P9-201ENST00000414760 368 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 RPS7P2-201ENST00000435134 607 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 AL590762.3-201ENST00000436372 640 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 HIGD1AP11-201ENST00000438361 280 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.72□□□□□ -1.97
NPHP4O75161 USP9YP8-201ENST00000441913 500 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 RNU7-95P-201ENST00000459222 64 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.72□□□□□ -1.97
NPHP4O75161 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.72□□□□□ -1.97
NPHP4O75161 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.72□□□□□ -1.97
NPHP4O75161 Y_RNA.670-201ENST00000516255 105 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 SNORA76.2-201ENST00000517095 137 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 SNORA31.20-201ENST00000517111 133 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 IGJP1-201ENST00000522682 475 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 OSBPL9P3-201ENST00000534523 595 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.72□□□□□ -1.97
NPHP4O75161 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.72□□□□□ -1.97
NPHP4O75161 MIR5002-201ENST00000584713 97 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 XIAPP1-201ENST00000603162 600 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 AC016542.1-201ENST00000608259 493 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 AC006213.5-201ENST00000619673 288 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 AC020923.1-201ENST00000624021 917 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.72□□□□□ -1.97
NPHP4O75161 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.72□□□□□ -1.97
NPHP4O75161 KPNA2P1-201ENST00000458289 1591 ntBASIC2.72□□□□□ -1.97
NPHP4O75161 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NPHP4O75161 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NPHP4O75161 RNU6-989P-201ENST00000362756 107 ntBASIC2.71□□□□□ -1.98
NPHP4O75161 OFD1P18Y-201ENST00000420889 959 ntBASIC2.71□□□□□ -1.98
NPHP4O75161 AC009237.2-201ENST00000421358 284 ntBASIC2.71□□□□□ -1.98
NPHP4O75161 AC027124.2-201ENST00000428249 105 ntBASIC2.71□□□□□ -1.98
NPHP4O75161 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.71□□□□□ -1.98
NPHP4O75161 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.71□□□□□ -1.98
NPHP4O75161 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NPHP4O75161 snoU13.3-201ENST00000459441 104 ntBASIC2.71□□□□□ -1.98
NPHP4O75161 RPS29P12-201ENST00000460178 152 ntBASIC2.71□□□□□ -1.98
NPHP4O75161 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.71□□□□□ -1.98
NPHP4O75161 AC104057.1-201ENST00000515547 497 ntBASIC2.71□□□□□ -1.98
NPHP4O75161 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.71□□□□□ -1.98
NPHP4O75161 SNORA4-201ENST00000584302 138 ntBASIC2.71□□□□□ -1.98
NPHP4O75161 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.71□□□□□ -1.98
NPHP4O75161 AL354696.1-201ENST00000614652 497 ntBASIC2.71□□□□□ -1.98
NPHP4O75161 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
NPHP4O75161 AC106730.3-201ENST00000624568 641 ntBASIC2.71□□□□□ -1.98
NPHP4O75161 HPVC1-201ENST00000629899 1198 ntBASIC2.71□□□□□ -1.98
NPHP4O75161 AC068620.4-201ENST00000636730 1182 ntBASIC2.71□□□□□ -1.98
NPHP4O75161 AC132825.7-201ENST00000638744 335 ntBASIC2.71□□□□□ -1.98
NPHP4O75161 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.71□□□□□ -1.98
NPHP4O75161 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NPHP4O75161 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.7□□□□□ -1.98
NPHP4O75161 RNA5SP56-201ENST00000410277 118 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 RNU2-68P-201ENST00000410878 191 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 RNU2-71P-201ENST00000411395 189 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 RPS3AP9-201ENST00000417027 792 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 HMGB1P27-201ENST00000431429 603 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 SDR42E1P3-201ENST00000438345 502 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 RABEPKP1-201ENST00000440529 1026 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 AC093392.2-201ENST00000450682 337 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 SSXP4-201ENST00000451349 245 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.7□□□□□ -1.98
NPHP4O75161 MTAPP1-201ENST00000489154 819 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 MTCO2P32-201ENST00000514865 403 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 SNORA31.15-201ENST00000516771 132 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.7□□□□□ -1.98
NPHP4O75161 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.7□□□□□ -1.98
NPHP4O75161 RN7SL622P-201ENST00000585292 275 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 AL669831.4-202ENST00000590817 238 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 VN1R88P-201ENST00000596787 292 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 AC013468.1-201ENST00000608680 598 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 AC006023.2-201ENST00000609916 167 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 AC098679.5-201ENST00000624394 571 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 AL121594.5-201ENST00000631724 573 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
NPHP4O75161 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NPHP4O75161 ZNF734P-201ENST00000419494 1534 ntBASIC2.7□□□□□ -1.98
NPHP4O75161 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
NPHP4O75161 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.7□□□□□ -1.98
NPHP4O75161 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms