Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 Y_RNA.404-201ENST00000383978 102 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 Y_RNA.428-201ENST00000384078 102 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 RNU6-1226P-201ENST00000384317 107 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 RNU1-106P-201ENST00000384382 164 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM13O60858 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 POLHP1-201ENST00000411806 470 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM13O60858 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM13O60858 RPL23AP25-201ENST00000430973 463 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 SNAP23P1-201ENST00000433229 246 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 MTND5P15-201ENST00000434246 349 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 AC105402.2-201ENST00000438503 358 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 RPL23AP89-201ENST00000439324 255 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 AL391987.1-201ENST00000441025 200 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM13O60858 ISCUP1-201ENST00000454451 448 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM13O60858 snoU13.7-201ENST00000459220 104 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 AC093267.1-201ENST00000489176 961 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 AC008897.1-201ENST00000494006 347 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM13O60858 AC116337.1-201ENST00000509680 687 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 AC025465.3-201ENST00000510570 311 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 Y_RNA.708-201ENST00000516950 96 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 OR10G5P-201ENST00000532733 358 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM13O60858 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM13O60858 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM13O60858 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM13O60858 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM13O60858 AC125232.2-201ENST00000592457 143 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 AC092447.9-201ENST00000603395 144 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 RPL23AP92-201ENST00000603609 255 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 AC092747.3-201ENST00000603769 301 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM13O60858 AC103710.2-201ENST00000609912 942 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 AL138726.1-201ENST00000614873 333 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 AC131238.1-201ENST00000617135 328 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 MIR7154-201ENST00000620673 73 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 AC244100.1-202ENST00000621554 382 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM13O60858 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TRIM13O60858 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
TRIM13O60858 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM13O60858 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM13O60858 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM13O60858 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM13O60858 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
TRIM13O60858 SAMMSON-226ENST00000642089 1582 ntBASIC4.53□□□□□ -1.69
TRIM13O60858 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM13O60858 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM13O60858 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM13O60858 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM13O60858 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM13O60858 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM13O60858 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM13O60858 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM13O60858 DDX18P3-201ENST00000404856 2007 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM13O60858 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
TRIM13O60858 Y_RNA.106-201ENST00000363189 100 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 Y_RNA.180-201ENST00000363867 113 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 RNU6-1243P-201ENST00000364028 107 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 RNA5SP22-201ENST00000365393 109 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 RNY3P13-201ENST00000365542 102 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 Y_RNA.785-201ENST00000384290 109 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM13O60858 RPL21P1-201ENST00000399532 476 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 RN7SKP216-201ENST00000411050 312 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AC068533.1-201ENST00000418542 415 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 PIGPP3-201ENST00000425307 415 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 RPS26P47-201ENST00000427219 348 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM13O60858 RPL21P2-201ENST00000440049 481 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM13O60858 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AC104073.1-201ENST00000451988 151 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AC112492.4-201ENST00000456549 352 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.52□□□□□ -1.69
TRIM13O60858 RPS26P28-201ENST00000470806 348 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AC103987.1-201ENST00000473394 348 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AC010683.1-201ENST00000473673 378 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.52□□□□□ -1.69
TRIM13O60858 RN7SL101P-201ENST00000496350 279 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 SCARNA22-201ENST00000503991 125 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM13O60858 RNU6-182P-201ENST00000516970 105 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AF186190.1-201ENST00000517470 480 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 IGKV3D-34-201ENST00000522638 302 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AC022616.4-201ENST00000522985 181 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AL137161.1-201ENST00000532231 390 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM13O60858 AC135001.1-201ENST00000544546 283 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM13O60858 MIR3691-201ENST00000578066 90 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 MIR1269B-201ENST00000580405 75 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms